Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05745

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,224,774	+		ABZR87_RS05740	0.21	-0.8
1,224,774	+		ABZR87_RS05740	0.21	+0.1
1,224,774	+		ABZR87_RS05740	0.21	-0.2
1,224,774	+		ABZR87_RS05740	0.21	-1.1
1,224,775	-		ABZR87_RS05740	0.21	-2.2
1,224,775	-		ABZR87_RS05740	0.21	-0.7
1,224,775	-		ABZR87_RS05740	0.21	+0.6
1,224,775	-		ABZR87_RS05740	0.21	-0.1
1,224,775	-		ABZR87_RS05740	0.21	-0.6
1,224,839	-		ABZR87_RS05740	0.26	-1.8
1,224,879	+		ABZR87_RS05740	0.29	-1.3
1,224,879	+		ABZR87_RS05740	0.29	+0.6
1,224,879	+		ABZR87_RS05740	0.29	-2.0
1,224,879	+		ABZR87_RS05740	0.29	-0.3
1,224,880	-		ABZR87_RS05740	0.29	+0.5
1,224,892	+		ABZR87_RS05740	0.30	-0.4
1,225,307	+		ABZR87_RS05740	0.64	-0.6
1,225,308	-		ABZR87_RS05740	0.65	-0.3
1,225,308	-		ABZR87_RS05740	0.65	+0.1
1,225,358	+		ABZR87_RS05740	0.69	+0.9
1,225,358	+		ABZR87_RS05740	0.69	+0.3
1,225,358	+		ABZR87_RS05740	0.69	+1.1
1,225,358	+		ABZR87_RS05740	0.69	-2.4
1,225,359	-		ABZR87_RS05740	0.69	+0.7
1,225,359	-		ABZR87_RS05740	0.69	-1.7
1,225,359	-		ABZR87_RS05740	0.69	-0.4
1,225,359	-		ABZR87_RS05740	0.69	-1.5
1,225,398	-		ABZR87_RS05740	0.72	-0.1
1,225,436	+		ABZR87_RS05740	0.75	-0.9
1,225,436	+		ABZR87_RS05740	0.75	+0.6
1,225,436	+		ABZR87_RS05740	0.75	-1.2
1,225,436	+		ABZR87_RS05740	0.75	+1.5
1,225,436	+		ABZR87_RS05740	0.75	-0.3
1,225,436	+		ABZR87_RS05740	0.75	-0.1
1,225,437	-		ABZR87_RS05740	0.75	+0.3
1,225,437	-		ABZR87_RS05740	0.75	+1.2
1,225,437	-		ABZR87_RS05740	0.75	-1.0
1,225,437	-		ABZR87_RS05740	0.75	+0.2
1,225,616	+		ABZR87_RS05740	0.90	-1.0
1,225,617	-		ABZR87_RS05740	0.90	-0.9
1,225,617	-		ABZR87_RS05740	0.90	+0.0
1,225,632	+				+0.1
1,225,633	-				-0.3
1,225,709	+				+0.7
1,225,725	+				-4.2
1,225,725	+				+1.4
1,225,725	+				+0.1
1,225,725	+				-0.0
1,225,725	+				-1.6
1,225,725	+				+1.6
1,225,725	+				-0.9
1,225,725	+				+0.7
1,225,725	+				-1.0
1,225,725	+				+1.7
1,225,726	-				+0.4
1,225,726	-				-0.1
1,225,726	-				+0.0
1,225,727	-				+0.2
1,225,738	+				+1.0
1,225,738	+				-0.4
1,225,738	+				-2.1
1,225,738	+				-1.8
1,225,738	+				-0.8
1,225,738	+				+0.2
1,225,738	+				+0.1
1,225,738	+				-0.5
1,225,738	+				+0.3
1,225,739	-				-1.0
1,225,739	-				-0.7
1,225,739	-				-1.2
1,225,739	-				+1.7
1,225,739	-				-1.1
1,225,739	-				-1.7
1,225,739	-				-0.5
1,225,739	-				-1.1
1,225,845	+		ABZR87_RS05745	0.12	-0.1
1,225,846	-		ABZR87_RS05745	0.12	+0.3
1,225,846	-		ABZR87_RS05745	0.12	-0.2
1,225,909	+		ABZR87_RS05745	0.20	+0.0
1,225,909	+		ABZR87_RS05745	0.20	-0.3
1,225,909	+		ABZR87_RS05745	0.20	-0.1
1,225,909	+		ABZR87_RS05745	0.20	-0.6
1,225,909	+		ABZR87_RS05745	0.20	-0.2
1,225,909	+		ABZR87_RS05745	0.20	+0.3
1,225,909	+		ABZR87_RS05745	0.20	-0.2
1,225,909	+		ABZR87_RS05745	0.20	+0.6
1,225,909	+		ABZR87_RS05745	0.20	+0.3
1,225,909	+		ABZR87_RS05745	0.20	+2.3
1,225,909	+		ABZR87_RS05745	0.20	+0.4
1,225,909	+		ABZR87_RS05745	0.20	-1.0
1,225,909	+		ABZR87_RS05745	0.20	-0.4
1,225,909	+		ABZR87_RS05745	0.20	-1.1
1,225,909	+		ABZR87_RS05745	0.20	+1.5
1,225,909	+		ABZR87_RS05745	0.20	+1.7
1,225,909	+		ABZR87_RS05745	0.20	+0.6
1,225,909	+		ABZR87_RS05745	0.20	-1.6
1,225,909	+		ABZR87_RS05745	0.20	+0.4
1,225,909	+		ABZR87_RS05745	0.20	-0.7
1,225,910	-		ABZR87_RS05745	0.20	-0.0
1,225,910	-		ABZR87_RS05745	0.20	+0.1
1,225,910	-		ABZR87_RS05745	0.20	+0.4
1,225,910	-		ABZR87_RS05745	0.20	-0.6
1,225,910	-		ABZR87_RS05745	0.20	-0.6
1,225,910	-		ABZR87_RS05745	0.20	-0.9
1,225,910	-		ABZR87_RS05745	0.20	-0.6
1,225,910	-		ABZR87_RS05745	0.20	+0.8
1,225,910	-		ABZR87_RS05745	0.20	+1.8
1,225,910	-		ABZR87_RS05745	0.20	-0.2
1,225,910	-		ABZR87_RS05745	0.20	-0.9
1,225,910	-		ABZR87_RS05745	0.20	-0.9
1,225,910	-		ABZR87_RS05745	0.20	+0.5
1,225,910	-		ABZR87_RS05745	0.20	-0.3
1,225,910	-		ABZR87_RS05745	0.20	-1.6
1,225,910	-		ABZR87_RS05745	0.20	-0.8
1,225,910	-		ABZR87_RS05745	0.20	-0.3
1,225,910	-		ABZR87_RS05745	0.20	+0.2
1,225,910	-		ABZR87_RS05745	0.20	-0.9
1,225,910	-		ABZR87_RS05745	0.20	-0.2
1,225,910	-		ABZR87_RS05745	0.20	+6.8
1,225,910	-		ABZR87_RS05745	0.20	-0.4
1,225,910	-		ABZR87_RS05745	0.20	+0.3
1,225,910	-		ABZR87_RS05745	0.20	+0.2
1,225,910	-		ABZR87_RS05745	0.20	-0.0
1,225,910	-		ABZR87_RS05745	0.20	+0.7
1,225,910	-		ABZR87_RS05745	0.20	+1.1
1,225,933	+		ABZR87_RS05745	0.23	-0.2
1,225,933	+		ABZR87_RS05745	0.23	+1.2
1,225,933	+		ABZR87_RS05745	0.23	-1.0
1,225,933	+		ABZR87_RS05745	0.23	-0.3
1,225,933	+		ABZR87_RS05745	0.23	-0.6
1,225,934	-		ABZR87_RS05745	0.23	+0.1
1,225,934	-		ABZR87_RS05745	0.23	+1.3
1,225,934	-		ABZR87_RS05745	0.23	+0.5
1,225,934	-		ABZR87_RS05745	0.23	-0.2
1,225,934	-		ABZR87_RS05745	0.23	+0.7
1,225,934	-		ABZR87_RS05745	0.23	-0.1
1,225,934	-		ABZR87_RS05745	0.23	+1.3
1,225,934	-		ABZR87_RS05745	0.23	+0.2
1,225,934	-		ABZR87_RS05745	0.23	+0.0
1,225,934	-		ABZR87_RS05745	0.23	+0.7
1,225,934	-		ABZR87_RS05745	0.23	+0.1
1,226,022	+		ABZR87_RS05745	0.35	-0.0
1,226,022	+		ABZR87_RS05745	0.35	-2.6
1,226,022	+		ABZR87_RS05745	0.35	+0.1
1,226,022	+		ABZR87_RS05745	0.35	+2.6
1,226,022	+		ABZR87_RS05745	0.35	+0.6
1,226,022	+		ABZR87_RS05745	0.35	-0.1
1,226,023	-		ABZR87_RS05745	0.35	+0.3
1,226,023	-		ABZR87_RS05745	0.35	-1.8
1,226,023	-		ABZR87_RS05745	0.35	+0.2
1,226,023	-		ABZR87_RS05745	0.35	+1.5
1,226,023	-		ABZR87_RS05745	0.35	+1.2
1,226,023	-		ABZR87_RS05745	0.35	-0.6
1,226,023	-		ABZR87_RS05745	0.35	+0.2
1,226,045	+		ABZR87_RS05745	0.38	-0.5
1,226,045	+		ABZR87_RS05745	0.38	-0.3
1,226,045	+		ABZR87_RS05745	0.38	-0.1
1,226,045	+		ABZR87_RS05745	0.38	-0.1
1,226,046	-		ABZR87_RS05745	0.38	+0.2
1,226,046	-		ABZR87_RS05745	0.38	+1.3
1,226,046	-		ABZR87_RS05745	0.38	+0.2
1,226,046	-		ABZR87_RS05745	0.38	-1.2
1,226,046	-		ABZR87_RS05745	0.38	-0.2
1,226,078	-		ABZR87_RS05745	0.42	-0.5
1,226,078	-		ABZR87_RS05745	0.42	-1.5
1,226,099	+		ABZR87_RS05745	0.45	+0.9
1,226,099	+		ABZR87_RS05745	0.45	+0.8
1,226,099	+		ABZR87_RS05745	0.45	+0.3
1,226,099	+		ABZR87_RS05745	0.45	-0.4
1,226,099	+		ABZR87_RS05745	0.45	-0.8
1,226,100	-		ABZR87_RS05745	0.45	+1.7
1,226,100	-		ABZR87_RS05745	0.45	-1.3
1,226,100	-		ABZR87_RS05745	0.45	+0.6
1,226,100	-		ABZR87_RS05745	0.45	+0.2
1,226,100	-		ABZR87_RS05745	0.45	-0.8
1,226,100	-		ABZR87_RS05745	0.45	+1.0
1,226,100	-		ABZR87_RS05745	0.45	-1.6
1,226,116	+		ABZR87_RS05745	0.47	-1.2
1,226,117	-		ABZR87_RS05745	0.47	+1.7
1,226,117	-		ABZR87_RS05745	0.47	-1.2
1,226,117	-		ABZR87_RS05745	0.47	-0.2
1,226,117	-		ABZR87_RS05745	0.47	+1.2
1,226,214	+		ABZR87_RS05745	0.59	+0.4
1,226,214	+		ABZR87_RS05745	0.59	-0.1
1,226,214	+		ABZR87_RS05745	0.59	-0.6
1,226,214	+		ABZR87_RS05745	0.59	+0.6
1,226,214	+		ABZR87_RS05745	0.59	+1.5
1,226,214	+		ABZR87_RS05745	0.59	-1.0
1,226,214	+		ABZR87_RS05745	0.59	-0.3
1,226,214	+		ABZR87_RS05745	0.59	+0.1
1,226,215	-		ABZR87_RS05745	0.59	-0.6
1,226,215	-		ABZR87_RS05745	0.59	-0.5
1,226,215	-		ABZR87_RS05745	0.59	+0.9
1,226,215	-		ABZR87_RS05745	0.59	+0.4
1,226,265	+		ABZR87_RS05745	0.66	-0.7
1,226,265	+		ABZR87_RS05745	0.66	+1.0
1,226,265	+		ABZR87_RS05745	0.66	+0.4
1,226,266	-		ABZR87_RS05745	0.66	-1.0
1,226,266	-		ABZR87_RS05745	0.66	+0.5
1,226,266	-		ABZR87_RS05745	0.66	-1.0
1,226,266	-		ABZR87_RS05745	0.66	+1.4
1,226,266	-		ABZR87_RS05745	0.66	-0.8
1,226,277	+		ABZR87_RS05745	0.67	+0.5
1,226,277	+		ABZR87_RS05745	0.67	-0.5
1,226,277	+		ABZR87_RS05745	0.67	+0.9
1,226,320	+		ABZR87_RS05745	0.73	-0.8
1,226,321	-		ABZR87_RS05745	0.73	-0.1
1,226,347	+		ABZR87_RS05745	0.76	-0.7
1,226,347	+		ABZR87_RS05745	0.76	+0.7
1,226,347	+		ABZR87_RS05745	0.76	+0.6
1,226,348	-		ABZR87_RS05745	0.77	+0.9
1,226,348	-		ABZR87_RS05745	0.77	-0.2
1,226,358	+		ABZR87_RS05745	0.78	+0.5
1,226,358	+		ABZR87_RS05745	0.78	+0.4
1,226,359	-		ABZR87_RS05745	0.78	-1.2
1,226,378	+		ABZR87_RS05745	0.80	-2.6
1,226,378	+		ABZR87_RS05745	0.80	+1.9
1,226,379	-		ABZR87_RS05745	0.81	-1.4
1,226,387	+		ABZR87_RS05745	0.82	-1.5
1,226,387	+		ABZR87_RS05745	0.82	-0.5
1,226,387	+		ABZR87_RS05745	0.82	+0.1
1,226,387	+		ABZR87_RS05745	0.82	+0.4
1,226,388	-		ABZR87_RS05745	0.82	+0.1
1,226,388	-		ABZR87_RS05745	0.82	+1.2
1,226,388	-		ABZR87_RS05745	0.82	-0.0
1,226,388	-		ABZR87_RS05745	0.82	-0.1
1,226,388	-		ABZR87_RS05745	0.82	-0.1
1,226,388	-		ABZR87_RS05745	0.82	+1.1
1,226,403	+		ABZR87_RS05745	0.84	+0.3
1,226,403	+		ABZR87_RS05745	0.84	+2.0
1,226,403	+		ABZR87_RS05745	0.84	-1.7
1,226,403	+		ABZR87_RS05745	0.84	-0.7
1,226,403	+		ABZR87_RS05745	0.84	-0.1
1,226,403	+		ABZR87_RS05745	0.84	+0.8
1,226,403	+		ABZR87_RS05745	0.84	-2.2
1,226,403	+		ABZR87_RS05745	0.84	-1.4
1,226,403	+		ABZR87_RS05745	0.84	+0.3
1,226,403	+		ABZR87_RS05745	0.84	+1.0
1,226,403	+		ABZR87_RS05745	0.84	+0.7
1,226,403	+		ABZR87_RS05745	0.84	+1.3
1,226,403	+		ABZR87_RS05745	0.84	-0.9
1,226,403	+		ABZR87_RS05745	0.84	+0.3
1,226,403	+		ABZR87_RS05745	0.84	-0.4
1,226,404	-		ABZR87_RS05745	0.84	+0.8
1,226,404	-		ABZR87_RS05745	0.84	-0.2
1,226,404	-		ABZR87_RS05745	0.84	+0.1
1,226,404	-		ABZR87_RS05745	0.84	+0.5
1,226,404	-		ABZR87_RS05745	0.84	-0.2
1,226,404	-		ABZR87_RS05745	0.84	-0.0
1,226,404	-		ABZR87_RS05745	0.84	+0.7
1,226,404	-		ABZR87_RS05745	0.84	+0.0
1,226,404	-		ABZR87_RS05745	0.84	-0.2
1,226,404	-		ABZR87_RS05745	0.84	+0.8
1,226,404	-		ABZR87_RS05745	0.84	+0.1
1,226,404	-		ABZR87_RS05745	0.84	+0.9
1,226,422	+		ABZR87_RS05745	0.86	+0.0
1,226,423	-		ABZR87_RS05745	0.86	+0.8
1,226,464	+				+0.7
1,226,465	-				-2.1
1,226,553	+				-0.7
1,226,553	+				-1.8
1,226,553	+				-0.3
1,226,553	+				-1.2
1,226,554	-				-0.2
1,226,554	-				-1.3
1,226,554	-				-1.2
1,226,554	-				-1.5
1,226,554	-				-0.0
1,226,598	-				+1.2
1,226,618	-				+1.1
1,226,618	-				-1.2
1,226,618	-				-0.5
1,226,623	+				-1.3
1,226,623	+				+0.0
1,226,623	+				-1.2
1,226,624	-				+1.6
1,226,624	-				+0.3
1,226,624	-				+0.0
1,226,635	+				+0.4
1,226,642	+				-0.1
1,226,642	+				+1.6
1,226,642	+				+1.3
1,226,643	-				-0.6
1,226,643	-				-0.1
1,226,681	+				-0.4
1,226,681	+				-0.6
1,226,681	+				+2.2
1,226,681	+				-0.4
1,226,682	-				-0.7
1,226,682	-				+1.6
1,226,682	-				-1.2
1,226,682	-				-1.0
1,226,682	-				-0.8
1,226,682	-				-0.1
1,226,734	+				-0.6
1,226,734	+				-0.1
1,226,786	+				-1.1
1,226,787	-				+0.2
1,226,787	-				-0.5
1,226,825	-		ABZR87_RS05750	0.10	-0.0
1,226,834	+		ABZR87_RS05750	0.11	-0.3
1,226,835	-		ABZR87_RS05750	0.11	+1.0
1,226,841	+		ABZR87_RS05750	0.11	-0.5
1,226,842	-		ABZR87_RS05750	0.11	-0.4
1,226,842	-		ABZR87_RS05750	0.11	+1.2
1,226,847	+		ABZR87_RS05750	0.12	-0.6
1,226,847	+		ABZR87_RS05750	0.12	+0.3
1,226,847	+		ABZR87_RS05750	0.12	+1.3
1,226,848	-		ABZR87_RS05750	0.12	+0.4
1,226,848	-		ABZR87_RS05750	0.12	-0.3
1,226,848	-		ABZR87_RS05750	0.12	-0.7
1,226,861	+		ABZR87_RS05750	0.13	-1.6
1,226,861	+		ABZR87_RS05750	0.13	-1.7
1,226,861	+		ABZR87_RS05750	0.13	+0.3
1,226,861	+		ABZR87_RS05750	0.13	-0.1
1,226,862	-		ABZR87_RS05750	0.13	+0.5
1,226,862	-		ABZR87_RS05750	0.13	+0.5
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