Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3135

Experiment: Magnesium chloride 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Magnesium chloride 0.125 M
3,624,190	-		Pf6N2E2_3132	0.45	-0.4
3,624,190	-		Pf6N2E2_3132	0.45	+0.2
3,624,190	-		Pf6N2E2_3132	0.45	-1.1
3,624,284	+		Pf6N2E2_3132	0.80	-2.2
3,624,284	+		Pf6N2E2_3132	0.80	-1.1
3,624,284	+		Pf6N2E2_3132	0.80	+1.8
3,624,311	+				+0.5
3,624,311	+				+0.4
3,624,312	-				+0.7
3,624,680	-		Pf6N2E2_3134	0.20	+1.1
3,624,816	+				-0.6
3,624,842	+				-0.2
3,624,842	+				+0.7
3,624,842	+				+1.1
3,624,907	-				+0.4
3,624,938	+				+0.6
3,624,943	+				-1.4
3,624,972	+				-0.2
3,624,973	-				+0.1
3,624,973	-				+1.6
3,624,984	+				+2.4
3,624,984	+				-0.6
3,624,985	-				+0.7
3,624,985	-				+1.4
3,625,035	+				+0.5
3,625,035	+				-0.6
3,625,036	-				+1.4
3,625,045	-				+2.0
3,625,083	+				+0.4
3,625,083	+				+0.8
3,625,083	+				+2.2
3,625,083	+				+0.6
3,625,083	+				-0.6
3,625,083	+				+0.7
3,625,083	+				+0.5
3,625,083	+				+0.1
3,625,084	-				+1.3
3,625,084	-				+0.9
3,625,092	+				-0.4
3,625,092	+				+0.2
3,625,092	+				+0.8
3,625,092	+				+0.8
3,625,092	+				+1.4
3,625,093	-				+1.3
3,625,093	-				+0.6
3,625,093	-				+1.6
3,625,135	-				+1.5
3,625,184	+				+1.7
3,625,184	+				+2.1
3,625,184	+				+2.1
3,625,184	+				+0.3
3,625,185	-				-0.3
3,625,185	-				+0.7
3,625,185	-				+2.9
3,625,185	-				+1.2
3,625,185	-				+0.8
3,625,185	-				+1.5
3,625,185	-				+2.2
3,625,185	-				+1.3
3,625,188	+				+2.6
3,625,188	+				+2.5
3,625,188	+				+3.4
3,625,188	+				-0.4
3,625,189	-				+2.2
3,625,189	-				+2.2
3,625,189	-				+0.5
3,625,189	-				+2.5
3,625,189	-				-0.0
3,625,235	-				+1.7
3,625,439	-		Pf6N2E2_3135	0.15	+2.1
3,625,537	+		Pf6N2E2_3135	0.21	+1.2
3,625,537	+		Pf6N2E2_3135	0.21	+3.0
3,625,537	+		Pf6N2E2_3135	0.21	+1.6
3,625,537	+		Pf6N2E2_3135	0.21	+1.8
3,625,537	+		Pf6N2E2_3135	0.21	+1.5
3,625,537	+		Pf6N2E2_3135	0.21	+1.7
3,625,538	-		Pf6N2E2_3135	0.21	+1.5
3,625,538	-		Pf6N2E2_3135	0.21	+2.6
3,625,538	-		Pf6N2E2_3135	0.21	+1.9
3,625,538	-		Pf6N2E2_3135	0.21	+1.8
3,625,538	-		Pf6N2E2_3135	0.21	+1.9
3,625,538	-		Pf6N2E2_3135	0.21	+1.1
3,625,538	-		Pf6N2E2_3135	0.21	+1.3
3,625,560	+		Pf6N2E2_3135	0.23	+1.2
3,625,561	-		Pf6N2E2_3135	0.23	+0.7
3,625,601	-		Pf6N2E2_3135	0.25	+2.0
3,625,720	+		Pf6N2E2_3135	0.33	+0.8
3,625,720	+		Pf6N2E2_3135	0.33	+3.0
3,625,786	+		Pf6N2E2_3135	0.37	+1.5
3,625,786	+		Pf6N2E2_3135	0.37	+1.8
3,625,871	-		Pf6N2E2_3135	0.42	+0.9
3,625,871	-		Pf6N2E2_3135	0.42	+2.7
3,626,222	-		Pf6N2E2_3135	0.63	+2.8
3,626,243	-		Pf6N2E2_3135	0.65	+0.6
3,626,319	+		Pf6N2E2_3135	0.69	+2.1
3,626,319	+		Pf6N2E2_3135	0.69	+1.8
3,626,320	-		Pf6N2E2_3135	0.69	+3.3
3,626,398	+		Pf6N2E2_3135	0.74	+1.8
3,626,398	+		Pf6N2E2_3135	0.74	+2.1
3,626,398	+		Pf6N2E2_3135	0.74	+1.0
3,626,398	+		Pf6N2E2_3135	0.74	+1.8
3,626,398	+		Pf6N2E2_3135	0.74	+1.8
3,626,399	-		Pf6N2E2_3135	0.74	+1.3
3,626,399	-		Pf6N2E2_3135	0.74	+2.1
3,626,399	-		Pf6N2E2_3135	0.74	+1.5
3,626,399	-		Pf6N2E2_3135	0.74	+2.7
3,626,399	-		Pf6N2E2_3135	0.74	+0.4
3,626,399	-		Pf6N2E2_3135	0.74	+2.9
3,626,399	-		Pf6N2E2_3135	0.74	+1.5
3,626,404	+		Pf6N2E2_3135	0.75	+2.0
3,626,669	-				+1.6
3,626,677	-				+1.5
3,626,773	+				+2.6
3,626,773	+				+1.6
3,626,773	+				+1.9
3,626,773	+				+1.4
3,626,773	+				+2.6
3,626,779	+				+2.0
3,626,779	+				+1.2
3,626,779	+				+2.0
3,626,780	-				+1.5
3,626,780	-				+3.2
3,626,809	+				+1.0
3,626,809	+				+0.9
3,626,809	+				+0.2
3,626,810	-				-0.5
3,626,810	-				+0.8
3,626,810	-				+1.0
3,626,857	+				+0.2
3,626,858	-				-0.6
3,626,921	+				-0.5
3,627,084	-		Pf6N2E2_3136	0.14	+0.5
3,627,378	+		Pf6N2E2_3136	0.40	+0.1
3,627,443	-		Pf6N2E2_3136	0.46	+0.4
3,627,494	-		Pf6N2E2_3136	0.51	+0.7
3,627,678	+		Pf6N2E2_3136	0.67	+0.8
3,627,678	+		Pf6N2E2_3136	0.67	-0.6
3,627,678	-		Pf6N2E2_3136	0.67	+2.1
3,627,679	-		Pf6N2E2_3136	0.68	-0.7
3,627,744	+		Pf6N2E2_3136	0.73	+1.0
3,627,744	+		Pf6N2E2_3136	0.73	+0.6
3,627,744	+		Pf6N2E2_3136	0.73	-0.5
3,627,744	+		Pf6N2E2_3136	0.73	+1.5
3,627,744	+		Pf6N2E2_3136	0.73	+0.4
3,627,745	-		Pf6N2E2_3136	0.74	-3.1
3,627,745	-		Pf6N2E2_3136	0.74	-0.4