Experiment: Magnesium chloride 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2465 and Pf6N2E2_2466 are separated by 110 nucleotides Pf6N2E2_2466 and Pf6N2E2_2467 are separated by 96 nucleotides
Pf6N2E2_2465 - Cys regulon transcriptional activator CysB, at 2,914,476 to 2,915,450
_2465
Pf6N2E2_2466 - Universal stress protein family, at 2,915,561 to 2,916,061
_2466
Pf6N2E2_2467 - 5'-nucleotidase (EC 3.1.3.5), at 2,916,158 to 2,917,063
_2467
Position (kb)
2915
2916
2917 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2914.754 kb on - strand, within Pf6N2E2_2465 at 2914.754 kb on - strand, within Pf6N2E2_2465 at 2914.857 kb on + strand, within Pf6N2E2_2465 at 2914.858 kb on - strand, within Pf6N2E2_2465 at 2914.858 kb on - strand, within Pf6N2E2_2465 at 2914.861 kb on + strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.862 kb on - strand, within Pf6N2E2_2465 at 2914.961 kb on - strand, within Pf6N2E2_2465 at 2915.372 kb on - strand at 2915.372 kb on - strand at 2915.428 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.450 kb on + strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.451 kb on - strand at 2915.454 kb on + strand at 2915.500 kb on - strand at 2915.500 kb on - strand at 2915.589 kb on - strand at 2915.605 kb on - strand at 2915.621 kb on + strand, within Pf6N2E2_2466 at 2915.622 kb on - strand, within Pf6N2E2_2466 at 2915.631 kb on - strand, within Pf6N2E2_2466 at 2915.690 kb on + strand, within Pf6N2E2_2466 at 2915.758 kb on - strand, within Pf6N2E2_2466 at 2915.758 kb on - strand, within Pf6N2E2_2466 at 2915.758 kb on - strand, within Pf6N2E2_2466 at 2915.905 kb on - strand, within Pf6N2E2_2466 at 2915.905 kb on - strand, within Pf6N2E2_2466 at 2915.946 kb on - strand, within Pf6N2E2_2466 at 2915.946 kb on - strand, within Pf6N2E2_2466 at 2915.946 kb on - strand, within Pf6N2E2_2466 at 2915.961 kb on + strand, within Pf6N2E2_2466 at 2915.961 kb on + strand, within Pf6N2E2_2466 at 2915.961 kb on + strand, within Pf6N2E2_2466 at 2915.961 kb on + strand, within Pf6N2E2_2466 at 2915.961 kb on + strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2915.962 kb on - strand, within Pf6N2E2_2466 at 2916.012 kb on + strand at 2916.012 kb on + strand at 2916.013 kb on - strand at 2916.013 kb on - strand at 2916.013 kb on - strand at 2916.021 kb on + strand at 2916.021 kb on + strand at 2916.042 kb on + strand at 2916.042 kb on + strand at 2916.042 kb on + strand at 2916.043 kb on - strand at 2916.043 kb on - strand at 2916.104 kb on + strand at 2916.104 kb on + strand at 2916.104 kb on + strand at 2916.104 kb on + strand at 2916.104 kb on + strand at 2916.105 kb on - strand at 2916.105 kb on - strand at 2916.105 kb on - strand at 2916.328 kb on + strand, within Pf6N2E2_2467 at 2916.329 kb on - strand, within Pf6N2E2_2467 at 2916.398 kb on - strand, within Pf6N2E2_2467 at 2916.541 kb on - strand, within Pf6N2E2_2467 at 2916.726 kb on + strand, within Pf6N2E2_2467 at 2916.981 kb on + strand at 2916.981 kb on + strand at 2916.981 kb on + strand at 2916.981 kb on + strand at 2916.982 kb on - strand at 2916.982 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Magnesium chloride 0.125 M remove 2,914,754 - Pf6N2E2_2465 0.29 -2.6 2,914,754 - Pf6N2E2_2465 0.29 -1.1 2,914,857 + Pf6N2E2_2465 0.39 -1.6 2,914,858 - Pf6N2E2_2465 0.39 -0.2 2,914,858 - Pf6N2E2_2465 0.39 -1.2 2,914,861 + Pf6N2E2_2465 0.39 -0.0 2,914,862 - Pf6N2E2_2465 0.40 -1.3 2,914,862 - Pf6N2E2_2465 0.40 -0.3 2,914,862 - Pf6N2E2_2465 0.40 -1.6 2,914,862 - Pf6N2E2_2465 0.40 -1.8 2,914,862 - Pf6N2E2_2465 0.40 -0.7 2,914,862 - Pf6N2E2_2465 0.40 -0.8 2,914,862 - Pf6N2E2_2465 0.40 -0.3 2,914,961 - Pf6N2E2_2465 0.50 -1.3 2,915,372 - -1.8 2,915,372 - +2.0 2,915,428 + +0.7 2,915,450 + -0.8 2,915,450 + -1.1 2,915,450 + -0.3 2,915,450 + -0.3 2,915,450 + +0.4 2,915,450 + -1.5 2,915,451 - +0.4 2,915,451 - -0.8 2,915,451 - -1.1 2,915,451 - -0.8 2,915,451 - +0.4 2,915,451 - -0.2 2,915,451 - -1.9 2,915,451 - +1.0 2,915,454 + -2.8 2,915,500 - +0.6 2,915,500 - -0.2 2,915,589 - +4.0 2,915,605 - +1.1 2,915,621 + Pf6N2E2_2466 0.12 +0.4 2,915,622 - Pf6N2E2_2466 0.12 +2.5 2,915,631 - Pf6N2E2_2466 0.14 +1.8 2,915,690 + Pf6N2E2_2466 0.26 -0.6 2,915,758 - Pf6N2E2_2466 0.39 +1.5 2,915,758 - Pf6N2E2_2466 0.39 +0.7 2,915,758 - Pf6N2E2_2466 0.39 +0.6 2,915,905 - Pf6N2E2_2466 0.69 +2.0 2,915,905 - Pf6N2E2_2466 0.69 +0.9 2,915,946 - Pf6N2E2_2466 0.77 +1.8 2,915,946 - Pf6N2E2_2466 0.77 +1.8 2,915,946 - Pf6N2E2_2466 0.77 +1.0 2,915,961 + Pf6N2E2_2466 0.80 -0.3 2,915,961 + Pf6N2E2_2466 0.80 +0.6 2,915,961 + Pf6N2E2_2466 0.80 +0.6 2,915,961 + Pf6N2E2_2466 0.80 -2.6 2,915,961 + Pf6N2E2_2466 0.80 +0.3 2,915,962 - Pf6N2E2_2466 0.80 +0.4 2,915,962 - Pf6N2E2_2466 0.80 +0.7 2,915,962 - Pf6N2E2_2466 0.80 +0.6 2,915,962 - Pf6N2E2_2466 0.80 +1.1 2,915,962 - Pf6N2E2_2466 0.80 +1.6 2,915,962 - Pf6N2E2_2466 0.80 +0.4 2,915,962 - Pf6N2E2_2466 0.80 +0.7 2,915,962 - Pf6N2E2_2466 0.80 +1.3 2,915,962 - Pf6N2E2_2466 0.80 +1.2 2,915,962 - +1.6 2,915,962 - Pf6N2E2_2466 0.80 +1.4 2,915,962 - Pf6N2E2_2466 0.80 +0.7 2,915,962 - Pf6N2E2_2466 0.80 +1.7 2,915,962 - Pf6N2E2_2466 0.80 +2.1 2,915,962 - Pf6N2E2_2466 0.80 +0.9 2,915,962 - Pf6N2E2_2466 0.80 +2.0 2,916,012 + -0.6 2,916,012 + +0.3 2,916,013 - -0.0 2,916,013 - +0.7 2,916,013 - +1.3 2,916,021 + -0.7 2,916,021 + -0.3 2,916,042 + -0.0 2,916,042 + +1.8 2,916,042 + +0.7 2,916,043 - +1.4 2,916,043 - +0.7 2,916,104 + +1.3 2,916,104 + -0.5 2,916,104 + -0.7 2,916,104 + -0.8 2,916,104 + +1.0 2,916,105 - +2.0 2,916,105 - +1.4 2,916,105 - +1.2 2,916,328 + Pf6N2E2_2467 0.19 +0.6 2,916,329 - Pf6N2E2_2467 0.19 +2.2 2,916,398 - Pf6N2E2_2467 0.26 -0.3 2,916,541 - Pf6N2E2_2467 0.42 +0.8 2,916,726 + Pf6N2E2_2467 0.63 +1.2 2,916,981 + +0.0 2,916,981 + -0.3 2,916,981 + +0.6 2,916,981 + -0.3 2,916,982 - -1.7 2,916,982 - -1.0
Or see this region's nucleotide sequence