Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1635

Experiment: Magnesium chloride 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Magnesium chloride 0.125 M
1,934,053	+		Pf6N2E2_1634	0.41	-1.4
1,934,053	+		Pf6N2E2_1634	0.41	-0.1
1,934,053	+		Pf6N2E2_1634	0.41	-1.2
1,934,054	-		Pf6N2E2_1634	0.41	-2.2
1,934,163	-		Pf6N2E2_1634	0.52	-0.9
1,934,163	-		Pf6N2E2_1634	0.52	+0.3
1,934,163	-		Pf6N2E2_1634	0.52	-1.0
1,934,300	+		Pf6N2E2_1634	0.66	-0.5
1,934,301	-		Pf6N2E2_1634	0.66	-0.6
1,934,301	-		Pf6N2E2_1634	0.66	-0.2
1,934,513	-		Pf6N2E2_1634	0.88	-1.7
1,934,513	-		Pf6N2E2_1634	0.88	-2.9
1,934,547	+				+0.3
1,934,547	+				-3.1
1,934,547	+				-0.9
1,934,547	+				+0.6
1,934,548	-				-0.1
1,934,548	-				-2.6
1,934,548	-				-2.2
1,934,709	+				-1.9
1,934,935	+				+0.1
1,934,936	-		Pf6N2E2_1635	0.37	-0.4
1,935,176	-		Pf6N2E2_1635	0.67	-1.4
1,935,295	+		Pf6N2E2_1635	0.82	-0.7
1,935,296	-		Pf6N2E2_1635	0.82	+0.1
1,935,311	+		Pf6N2E2_1635	0.84	-2.5
1,935,311	+		Pf6N2E2_1635	0.84	+1.6
1,935,312	-		Pf6N2E2_1635	0.84	-1.5
1,935,312	-		Pf6N2E2_1635	0.84	-1.4
1,935,312	-		Pf6N2E2_1635	0.84	-0.4
1,935,312	-		Pf6N2E2_1635	0.84	-1.9
1,935,411	+				-1.6
1,935,411	+				+1.6
1,935,411	+				-0.9
1,935,527	+				-1.7
1,935,549	+				+0.1
1,935,549	+				-0.9
1,935,549	+				-1.8
1,935,549	+				+0.8
1,935,550	-				+1.3
1,935,550	-				+1.0
1,935,550	-				-1.5
1,935,550	-				-0.6
1,935,550	-				+0.8
1,935,550	-				+0.6
1,935,550	-				-2.4
1,935,566	-				-0.6
1,935,566	-				-1.3
1,935,566	-				-0.4
1,935,582	-				-0.2
1,935,637	+				-0.6
1,935,646	+				-2.3
1,935,667	+				-0.3
1,935,667	+				-0.8
1,935,667	+				-0.8
1,935,668	-				-1.3
1,935,668	-				-0.9
1,935,879	+				+0.1
1,936,085	-		Pf6N2E2_1636	0.16	+0.3
1,936,161	-		Pf6N2E2_1636	0.19	-1.5
1,936,216	+		Pf6N2E2_1636	0.22	-1.7