Experiment: Magnesium chloride 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1290 and Pf6N2E2_1291 are separated by 813 nucleotides Pf6N2E2_1291 and Pf6N2E2_1292 are separated by 377 nucleotides
Pf6N2E2_1290 - Protein containing domains DUF404, DUF407, at 1,520,605 to 1,522,014
_1290
Pf6N2E2_1291 - Ferrichrome-iron receptor, at 1,522,828 to 1,524,852
_1291
Pf6N2E2_1292 - Methyl-accepting chemotaxis protein, at 1,525,230 to 1,527,026
_1292
Position (kb)
1522
1523
1524
1525 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1521.987 kb on - strand at 1521.987 kb on - strand at 1521.987 kb on - strand at 1522.036 kb on + strand at 1522.174 kb on + strand at 1522.235 kb on + strand at 1522.359 kb on - strand at 1522.397 kb on + strand at 1522.397 kb on + strand at 1522.398 kb on - strand at 1522.498 kb on + strand at 1522.498 kb on + strand at 1522.498 kb on + strand at 1522.499 kb on - strand at 1522.499 kb on - strand at 1522.499 kb on - strand at 1522.540 kb on - strand at 1522.742 kb on + strand at 1522.742 kb on + strand at 1522.815 kb on + strand at 1522.911 kb on - strand at 1522.913 kb on + strand at 1522.913 kb on + strand at 1522.913 kb on + strand at 1522.913 kb on + strand at 1522.914 kb on - strand at 1522.914 kb on - strand at 1523.009 kb on + strand at 1523.009 kb on + strand at 1523.009 kb on + strand at 1523.060 kb on + strand, within Pf6N2E2_1291 at 1523.127 kb on - strand, within Pf6N2E2_1291 at 1523.127 kb on - strand, within Pf6N2E2_1291 at 1523.127 kb on - strand, within Pf6N2E2_1291 at 1523.191 kb on + strand, within Pf6N2E2_1291 at 1523.192 kb on - strand, within Pf6N2E2_1291 at 1523.208 kb on - strand, within Pf6N2E2_1291 at 1523.213 kb on + strand, within Pf6N2E2_1291 at 1523.213 kb on + strand, within Pf6N2E2_1291 at 1523.213 kb on + strand, within Pf6N2E2_1291 at 1523.213 kb on + strand, within Pf6N2E2_1291 at 1523.214 kb on - strand at 1523.402 kb on + strand, within Pf6N2E2_1291 at 1523.402 kb on + strand, within Pf6N2E2_1291 at 1523.402 kb on + strand, within Pf6N2E2_1291 at 1523.430 kb on + strand, within Pf6N2E2_1291 at 1523.477 kb on + strand, within Pf6N2E2_1291 at 1523.486 kb on + strand, within Pf6N2E2_1291 at 1523.514 kb on - strand, within Pf6N2E2_1291 at 1523.595 kb on - strand, within Pf6N2E2_1291 at 1523.595 kb on - strand, within Pf6N2E2_1291 at 1523.595 kb on - strand, within Pf6N2E2_1291 at 1523.595 kb on - strand, within Pf6N2E2_1291 at 1523.604 kb on - strand, within Pf6N2E2_1291 at 1523.670 kb on - strand, within Pf6N2E2_1291 at 1523.742 kb on + strand, within Pf6N2E2_1291 at 1523.748 kb on - strand, within Pf6N2E2_1291 at 1523.748 kb on - strand, within Pf6N2E2_1291 at 1523.749 kb on + strand, within Pf6N2E2_1291 at 1523.764 kb on - strand, within Pf6N2E2_1291 at 1523.826 kb on + strand, within Pf6N2E2_1291 at 1523.916 kb on - strand, within Pf6N2E2_1291 at 1523.946 kb on + strand, within Pf6N2E2_1291 at 1523.947 kb on - strand, within Pf6N2E2_1291 at 1523.947 kb on - strand, within Pf6N2E2_1291 at 1524.008 kb on + strand, within Pf6N2E2_1291 at 1524.008 kb on + strand, within Pf6N2E2_1291 at 1524.009 kb on - strand at 1524.044 kb on + strand, within Pf6N2E2_1291 at 1524.044 kb on + strand, within Pf6N2E2_1291 at 1524.185 kb on + strand, within Pf6N2E2_1291 at 1524.185 kb on + strand, within Pf6N2E2_1291 at 1524.185 kb on + strand, within Pf6N2E2_1291 at 1524.191 kb on + strand, within Pf6N2E2_1291 at 1524.267 kb on - strand, within Pf6N2E2_1291 at 1524.267 kb on - strand, within Pf6N2E2_1291 at 1524.464 kb on + strand, within Pf6N2E2_1291 at 1524.464 kb on + strand, within Pf6N2E2_1291 at 1524.778 kb on - strand at 1524.778 kb on - strand at 1525.040 kb on + strand at 1525.040 kb on + strand at 1525.040 kb on + strand at 1525.040 kb on + strand at 1525.166 kb on - strand at 1525.166 kb on - strand at 1525.241 kb on - strand at 1525.251 kb on + strand at 1525.252 kb on - strand at 1525.252 kb on - strand at 1525.338 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Magnesium chloride 0.125 M remove 1,521,987 - +0.5 1,521,987 - +0.2 1,521,987 - -0.1 1,522,036 + +0.5 1,522,174 + +1.5 1,522,235 + +0.2 1,522,359 - -1.0 1,522,397 + -0.4 1,522,397 + +0.2 1,522,398 - -0.8 1,522,498 + -1.5 1,522,498 + +1.5 1,522,498 + -0.5 1,522,499 - -0.7 1,522,499 - +0.2 1,522,499 - +1.4 1,522,540 - +0.2 1,522,742 + +1.8 1,522,742 + +1.5 1,522,815 + -1.3 1,522,911 - +0.8 1,522,913 + -2.3 1,522,913 + +2.5 1,522,913 + +0.5 1,522,913 + -0.7 1,522,914 - +0.8 1,522,914 - +0.2 1,523,009 + -0.2 1,523,009 + +1.1 1,523,009 + +1.8 1,523,060 + Pf6N2E2_1291 0.11 +0.7 1,523,127 - Pf6N2E2_1291 0.15 +1.5 1,523,127 - Pf6N2E2_1291 0.15 +0.4 1,523,127 - Pf6N2E2_1291 0.15 -0.1 1,523,191 + Pf6N2E2_1291 0.18 -1.1 1,523,192 - Pf6N2E2_1291 0.18 -0.7 1,523,208 - Pf6N2E2_1291 0.19 -0.3 1,523,213 + Pf6N2E2_1291 0.19 -0.3 1,523,213 + Pf6N2E2_1291 0.19 -0.8 1,523,213 + Pf6N2E2_1291 0.19 +0.9 1,523,213 + Pf6N2E2_1291 0.19 -0.6 1,523,214 - +1.5 1,523,402 + Pf6N2E2_1291 0.28 -0.5 1,523,402 + Pf6N2E2_1291 0.28 +1.5 1,523,402 + Pf6N2E2_1291 0.28 +0.1 1,523,430 + Pf6N2E2_1291 0.30 -0.1 1,523,477 + Pf6N2E2_1291 0.32 +0.7 1,523,486 + Pf6N2E2_1291 0.32 -0.1 1,523,514 - Pf6N2E2_1291 0.34 -0.8 1,523,595 - Pf6N2E2_1291 0.38 -0.5 1,523,595 - Pf6N2E2_1291 0.38 +1.2 1,523,595 - Pf6N2E2_1291 0.38 +0.5 1,523,595 - Pf6N2E2_1291 0.38 -1.1 1,523,604 - Pf6N2E2_1291 0.38 -1.5 1,523,670 - Pf6N2E2_1291 0.42 +0.3 1,523,742 + Pf6N2E2_1291 0.45 -0.8 1,523,748 - Pf6N2E2_1291 0.45 -0.5 1,523,748 - Pf6N2E2_1291 0.45 +0.9 1,523,749 + Pf6N2E2_1291 0.45 -1.5 1,523,764 - Pf6N2E2_1291 0.46 -2.3 1,523,826 + Pf6N2E2_1291 0.49 +0.7 1,523,916 - Pf6N2E2_1291 0.54 -1.8 1,523,946 + Pf6N2E2_1291 0.55 -0.5 1,523,947 - Pf6N2E2_1291 0.55 +0.2 1,523,947 - Pf6N2E2_1291 0.55 +0.6 1,524,008 + Pf6N2E2_1291 0.58 +0.1 1,524,008 + Pf6N2E2_1291 0.58 -1.6 1,524,009 - +0.8 1,524,044 + Pf6N2E2_1291 0.60 +0.0 1,524,044 + Pf6N2E2_1291 0.60 +0.7 1,524,185 + Pf6N2E2_1291 0.67 -0.8 1,524,185 + Pf6N2E2_1291 0.67 -0.4 1,524,185 + Pf6N2E2_1291 0.67 -0.3 1,524,191 + Pf6N2E2_1291 0.67 -0.0 1,524,267 - Pf6N2E2_1291 0.71 -0.5 1,524,267 - Pf6N2E2_1291 0.71 +0.5 1,524,464 + Pf6N2E2_1291 0.81 +0.5 1,524,464 + Pf6N2E2_1291 0.81 +0.2 1,524,778 - -0.7 1,524,778 - +0.5 1,525,040 + -1.2 1,525,040 + +0.3 1,525,040 + +0.2 1,525,040 + -0.9 1,525,166 - +0.2 1,525,166 - -0.5 1,525,241 - +0.4 1,525,251 + -0.2 1,525,252 - -0.3 1,525,252 - +1.3 1,525,338 + -1.1
Or see this region's nucleotide sequence