Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1287
Experiment: Magnesium chloride 0.125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Magnesium chloride 0.125 M |
---|---|---|---|---|---|
remove | |||||
1,516,903 | + | Pf6N2E2_1286 | 0.46 | -0.7 | |
1,516,921 | + | Pf6N2E2_1286 | 0.47 | -0.8 | |
1,516,922 | - | Pf6N2E2_1286 | 0.47 | -0.6 | |
1,516,922 | - | Pf6N2E2_1286 | 0.47 | -1.5 | |
1,517,122 | + | Pf6N2E2_1286 | 0.60 | -1.5 | |
1,517,122 | + | Pf6N2E2_1286 | 0.60 | -0.4 | |
1,517,167 | + | Pf6N2E2_1286 | 0.62 | -0.7 | |
1,517,167 | + | Pf6N2E2_1286 | 0.62 | -0.8 | |
1,517,386 | + | Pf6N2E2_1286 | 0.76 | +0.0 | |
1,517,387 | - | Pf6N2E2_1286 | 0.76 | -0.1 | |
1,518,039 | + | Pf6N2E2_1287 | 0.40 | -0.3 | |
1,518,040 | - | Pf6N2E2_1287 | 0.40 | +0.2 | |
1,518,040 | - | Pf6N2E2_1287 | 0.40 | -2.9 | |
1,518,054 | + | Pf6N2E2_1287 | 0.42 | -1.5 | |
1,518,092 | + | Pf6N2E2_1287 | 0.49 | +0.9 | |
1,518,093 | - | Pf6N2E2_1287 | 0.49 | -0.5 | |
1,518,401 | - | +0.6 | |||
1,518,810 | - | +0.3 | |||
1,518,858 | + | -0.6 | |||
1,518,859 | - | -1.1 | |||
1,519,030 | - | Pf6N2E2_1288 | 0.22 | -0.3 | |
1,519,101 | + | Pf6N2E2_1288 | 0.31 | +0.5 | |
1,519,113 | + | Pf6N2E2_1288 | 0.32 | +1.3 |
Or see this region's nucleotide sequence