Strain Fitness in Pantoea sp. MT58 around IAI47_06775

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,411,870	+		IAI47_06765	0.54	-2.2
1,411,870	+		IAI47_06765	0.54	-0.4
1,411,870	+		IAI47_06765	0.54	-0.1
1,411,870	+		IAI47_06765	0.54	+1.0
1,411,871	-		IAI47_06765	0.54	+1.0
1,411,871	-		IAI47_06765	0.54	+0.7
1,411,871	-		IAI47_06765	0.54	-0.6
1,411,871	-		IAI47_06765	0.54	+0.3
1,411,871	-		IAI47_06765	0.54	-1.1
1,411,871	-		IAI47_06765	0.54	+1.0
1,411,876	+		IAI47_06765	0.54	-1.7
1,411,876	+		IAI47_06765	0.54	+0.4
1,411,876	+		IAI47_06765	0.54	-0.1
1,411,876	+		IAI47_06765	0.54	+0.1
1,411,876	+		IAI47_06765	0.54	-0.9
1,411,877	-		IAI47_06765	0.55	+1.7
1,411,906	+		IAI47_06765	0.59	+0.7
1,411,906	+		IAI47_06765	0.59	+1.3
1,411,907	-		IAI47_06765	0.59	-1.3
1,411,907	-		IAI47_06765	0.59	+1.5
1,411,962	+		IAI47_06765	0.67	+1.0
1,412,032	-		IAI47_06765	0.77	-0.1
1,412,051	+		IAI47_06765	0.80	-0.9
1,412,052	-		IAI47_06765	0.80	+1.2
1,412,052	-		IAI47_06765	0.80	-0.3
1,412,071	+		IAI47_06765	0.83	+0.5
1,412,180	+				-1.2
1,412,180	+				+0.2
1,412,180	+				-0.0
1,412,180	+				-0.3
1,412,180	+				-1.4
1,412,180	+				+0.0
1,412,180	+				+1.4
1,412,180	+				+1.5
1,412,181	-				+1.0
1,412,181	-				+0.9
1,412,181	-				+0.1
1,412,181	-				-0.3
1,412,181	-				+0.8
1,412,181	-				+0.1
1,412,238	+		IAI47_06770	0.14	+0.2
1,412,238	+		IAI47_06770	0.14	-0.0
1,412,239	-		IAI47_06770	0.14	-0.6
1,412,239	-		IAI47_06770	0.14	+0.6
1,412,239	-		IAI47_06770	0.14	+0.0
1,412,292	-		IAI47_06770	0.27	+0.9
1,412,323	+		IAI47_06770	0.35	-0.0
1,412,323	+		IAI47_06770	0.35	-0.6
1,412,324	-		IAI47_06770	0.36	-1.2
1,412,324	-		IAI47_06770	0.36	-0.0
1,412,331	+		IAI47_06770	0.37	-0.5
1,412,366	+		IAI47_06770	0.46	-0.4
1,412,366	+		IAI47_06770	0.46	+2.3
1,412,367	-		IAI47_06770	0.47	+2.7
1,412,367	-		IAI47_06770	0.47	-0.2
1,412,367	-		IAI47_06770	0.47	+0.3
1,412,368	+		IAI47_06770	0.47	+0.7
1,412,368	+		IAI47_06770	0.47	+0.7
1,412,368	+		IAI47_06770	0.47	-2.7
1,412,369	-		IAI47_06770	0.47	-1.3
1,412,369	-		IAI47_06770	0.47	+0.9
1,412,369	-		IAI47_06770	0.47	+1.6
1,412,445	+		IAI47_06770	0.66	+1.0
1,412,445	+		IAI47_06770	0.66	+1.4
1,412,445	+		IAI47_06770	0.66	-0.1
1,412,446	-		IAI47_06770	0.67	+0.1
1,412,446	-		IAI47_06770	0.67	-1.2
1,412,478	-		IAI47_06770	0.75	+0.9
1,412,495	+		IAI47_06770	0.79	-1.2
1,412,509	+		IAI47_06770	0.83	+0.6
1,412,509	+		IAI47_06770	0.83	+0.1
1,412,509	+		IAI47_06770	0.83	+0.1
1,412,510	-		IAI47_06770	0.83	-0.7
1,412,510	-		IAI47_06770	0.83	-0.4
1,412,511	+		IAI47_06770	0.83	+0.5
1,412,511	+		IAI47_06770	0.83	+0.7
1,412,511	+		IAI47_06770	0.83	+0.7
1,412,511	+		IAI47_06770	0.83	-2.7
1,412,511	+		IAI47_06770	0.83	-0.1
1,412,512	-		IAI47_06770	0.83	-1.2
1,412,512	-		IAI47_06770	0.83	-0.6
1,412,512	-		IAI47_06770	0.83	+0.8
1,412,512	-		IAI47_06770	0.83	+0.4
1,412,521	+		IAI47_06770	0.86	-0.1
1,412,521	+		IAI47_06770	0.86	-0.6
1,412,521	+		IAI47_06770	0.86	-1.1
1,412,521	+		IAI47_06770	0.86	-0.3
1,412,522	-		IAI47_06770	0.86	+0.6
1,412,522	-		IAI47_06770	0.86	-1.6
1,412,531	+		IAI47_06770	0.88	-0.5
1,412,531	+		IAI47_06770	0.88	-0.1
1,412,532	-		IAI47_06770	0.89	-0.0
1,412,532	-		IAI47_06770	0.89	-0.9
1,412,545	+				+0.0
1,412,546	-				-1.0
1,412,546	-				-1.6
1,412,608	+				-0.2
1,412,608	+				+1.7
1,412,609	-				+0.6
1,412,609	-				+0.7
1,412,609	-				-0.9
1,412,609	-				+1.1
1,412,609	-				-0.6
1,412,609	-				+0.9
1,412,644	+				+0.3
1,412,644	+				+1.1
1,412,644	+				+0.3
1,412,645	-				+1.1
1,412,645	-				-1.3
1,412,645	-				+0.7
1,412,645	-				+0.7
1,412,645	-				+0.7
1,412,645	-				-1.1
1,412,645	-				+0.3
1,412,743	+				-0.3
1,412,743	+				+0.5
1,412,743	+				-0.2
1,412,743	+				-0.6
1,412,743	+				+0.1
1,412,744	-				-2.0
1,412,744	-				+0.2
1,412,744	-				+1.1
1,412,744	-				-0.9
1,412,744	-				-0.1
1,412,785	+				+0.1
1,412,785	+				-0.6
1,412,785	+				+0.4
1,412,807	+				+0.1
1,412,807	+				+0.1
1,412,808	-				+0.9
1,412,808	-				+2.1
1,412,808	-				+1.4
1,412,808	-				+3.5
1,412,808	-				-0.1
1,412,808	-				+4.0
1,412,808	-				+0.1
1,412,808	-				-0.9
1,412,812	-				-1.3
1,412,812	-				+0.3
1,412,828	-				-0.4
1,414,878	-				+1.6
1,414,878	-				+1.0
1,414,878	-				+1.0
1,414,878	-				+2.5
1,414,878	-				+0.5
1,414,878	-				+0.7
1,414,878	-				-0.9
1,414,878	-				+0.3
1,414,878	-				+0.2
1,414,878	-				+0.9
1,414,885	-				-0.3
1,414,885	-				+0.2
1,414,885	-				+0.5
1,414,911	+				+0.6
1,414,912	-				-1.4
1,414,912	-				-0.7
1,414,912	-				-0.2
1,414,912	-				-0.7
1,414,912	-				-0.8
1,414,956	+				+0.4
1,414,957	-				-0.3
1,414,968	+				+0.7
1,414,968	+				+0.4
1,414,968	+				+0.6
1,414,968	+				+1.7
1,414,968	+				+1.7
1,414,969	-				-0.0
1,414,969	-				+0.5
1,414,969	-				-0.1
1,414,969	-				+1.7
1,414,988	+				-0.1
1,414,988	+				+1.7
1,414,988	+				+0.6
1,414,988	+				+1.8
1,414,988	+				+0.9
1,414,989	-				+0.2
1,414,989	-				-0.3
1,414,989	-				+1.1
1,414,989	-				-2.0
1,414,989	-				+0.7
1,415,003	+				+0.9
1,415,003	+				+0.5
1,415,003	+				+1.4
1,415,003	+				+0.7
1,415,004	-				-0.3
1,415,004	-				-0.9
1,415,023	+				+0.4
1,415,023	+				+2.7
1,415,023	+				+0.5
1,415,023	+				+2.3
1,415,023	+				+2.4
1,415,023	+				+0.1
1,415,023	+				+0.0
1,415,024	-				+0.6
1,415,024	-				+1.4
1,415,024	-				+2.2
1,415,024	-				-0.0
1,415,077	+				+2.3
1,415,106	-				+1.2
1,415,289	-		IAI47_06780	0.25	+1.1
1,415,345	+		IAI47_06780	0.30	+3.2
1,415,345	+		IAI47_06780	0.30	+0.1
1,415,345	+		IAI47_06780	0.30	+1.7
1,415,378	+		IAI47_06780	0.33	+2.2
1,415,378	+		IAI47_06780	0.33	+2.9
1,415,395	+		IAI47_06780	0.34	-0.3
1,415,395	+		IAI47_06780	0.34	+2.3
1,415,396	-		IAI47_06780	0.34	-1.1
1,415,399	+		IAI47_06780	0.34	+0.7
1,415,400	-		IAI47_06780	0.35	+2.3
1,415,400	-		IAI47_06780	0.35	-0.4
1,415,453	+		IAI47_06780	0.39	+1.5
1,415,454	-		IAI47_06780	0.39	+0.9
1,415,457	+		IAI47_06780	0.40	+1.0
1,415,458	-		IAI47_06780	0.40	-1.4
1,415,458	-		IAI47_06780	0.40	+0.9
1,415,458	-		IAI47_06780	0.40	+1.6
1,415,458	-		IAI47_06780	0.40	+1.7
1,415,525	+		IAI47_06780	0.46	+1.5
1,415,525	+		IAI47_06780	0.46	+2.4
1,415,526	-		IAI47_06780	0.46	+0.1
1,415,526	-		IAI47_06780	0.46	+0.5
1,415,571	+		IAI47_06780	0.50	+1.2
1,415,572	-		IAI47_06780	0.50	+0.9
1,415,621	+		IAI47_06780	0.54	+1.5
1,415,630	+		IAI47_06780	0.55	-0.3
1,415,630	+		IAI47_06780	0.55	-0.6
1,415,630	+		IAI47_06780	0.55	+4.1
1,415,671	-		IAI47_06780	0.59	+0.1
1,415,684	+		IAI47_06780	0.60	+4.0
1,415,684	+		IAI47_06780	0.60	-0.3
1,415,685	-		IAI47_06780	0.60	-0.3