Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16905

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,868,137	-		HSERO_RS16895	0.85	+1.6
3,868,218	-				+1.1
3,868,243	-				+0.7
3,868,475	+				-0.3
3,868,492	+				-0.2
3,869,075	-				-0.4
3,869,080	+				+1.0
3,869,098	-				-0.0
3,869,116	-				+0.7
3,869,191	+		HSERO_RS16905	0.26	+0.7
3,869,226	+		HSERO_RS16905	0.33	+0.7
3,869,236	+		HSERO_RS16905	0.35	-0.6
3,869,425	+				-0.4
3,869,425	+		HSERO_RS16905	0.75	+0.1
3,869,433	-		HSERO_RS16905	0.77	-0.0
3,869,775	-				+1.4
3,869,903	+				-0.3
3,870,117	-		HSERO_RS16910	0.48	+0.7
3,870,117	-		HSERO_RS16910	0.48	+0.9
3,870,119	+		HSERO_RS16910	0.48	+0.2
3,870,119	+		HSERO_RS16910	0.48	-0.0
3,870,299	-		HSERO_RS16910	0.87	-0.4
3,870,353	+				+1.0
3,870,360	+				+0.7
3,870,399	+				+0.4
3,870,465	-				-0.1
3,870,534	+		HSERO_RS16915	0.12	+0.7