Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09690

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,197,908	+		HSERO_RS09685	0.61	-0.8
2,197,949	+		HSERO_RS09685	0.65	+1.3
2,198,443	+				-1.3
2,198,509	-				-1.1
2,198,661	-		HSERO_RS09690	0.18	-1.1
2,198,704	+		HSERO_RS09690	0.20	+0.4
2,198,819	-		HSERO_RS09690	0.26	-0.5
2,198,821	-		HSERO_RS09690	0.26	-0.7
2,199,229	-		HSERO_RS09690	0.48	-1.0
2,199,288	-		HSERO_RS09690	0.52	-0.2
2,199,488	-		HSERO_RS09690	0.62	-1.3
2,200,199	-				+0.2