Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23730 and BWI76_RS23735 overlap by 4 nucleotides BWI76_RS23735 and BWI76_RS23740 are separated by 320 nucleotides
BWI76_RS23730: BWI76_RS23730 - glycerate kinase, at 4,954,064 to 4,955,239
_RS23730
BWI76_RS23735: BWI76_RS23735 - sugar diacid utilization regulator, at 4,955,236 to 4,956,393
_RS23735
BWI76_RS23740: BWI76_RS23740 - MFS transporter, at 4,956,714 to 4,958,363
_RS23740
Position (kb)
4955
4956
4957 Strain fitness (log2 ratio)
-1
0
1 at 4954.401 kb on + strand, within BWI76_RS23730 at 4954.409 kb on - strand, within BWI76_RS23730 at 4954.420 kb on + strand, within BWI76_RS23730 at 4954.568 kb on + strand, within BWI76_RS23730 at 4954.568 kb on + strand, within BWI76_RS23730 at 4954.669 kb on + strand, within BWI76_RS23730 at 4954.677 kb on - strand, within BWI76_RS23730 at 4954.677 kb on - strand, within BWI76_RS23730 at 4954.839 kb on - strand, within BWI76_RS23730 at 4954.900 kb on + strand, within BWI76_RS23730 at 4955.375 kb on - strand, within BWI76_RS23735 at 4955.987 kb on - strand, within BWI76_RS23735 at 4956.149 kb on - strand, within BWI76_RS23735 at 4956.233 kb on - strand, within BWI76_RS23735 at 4956.341 kb on + strand at 4956.383 kb on + strand at 4956.491 kb on - strand at 4956.752 kb on - strand at 4956.855 kb on + strand at 4956.855 kb on + strand at 4956.863 kb on - strand at 4956.863 kb on - strand at 4957.057 kb on + strand, within BWI76_RS23740 at 4957.198 kb on + strand, within BWI76_RS23740 at 4957.208 kb on + strand, within BWI76_RS23740 at 4957.315 kb on - strand, within BWI76_RS23740
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,954,401 + BWI76_RS23730 0.29 -0.9 4,954,409 - BWI76_RS23730 0.29 +0.2 4,954,420 + BWI76_RS23730 0.30 +0.4 4,954,568 + BWI76_RS23730 0.43 +0.7 4,954,568 + BWI76_RS23730 0.43 +0.4 4,954,669 + BWI76_RS23730 0.51 +0.2 4,954,677 - BWI76_RS23730 0.52 -0.4 4,954,677 - BWI76_RS23730 0.52 -0.2 4,954,839 - BWI76_RS23730 0.66 +0.4 4,954,900 + BWI76_RS23730 0.71 +0.2 4,955,375 - BWI76_RS23735 0.12 +0.4 4,955,987 - BWI76_RS23735 0.65 +0.3 4,956,149 - BWI76_RS23735 0.79 -0.4 4,956,233 - BWI76_RS23735 0.86 -0.3 4,956,341 + +0.3 4,956,383 + +1.7 4,956,491 - +0.1 4,956,752 - -0.1 4,956,855 + -1.0 4,956,855 + -0.8 4,956,863 - -0.1 4,956,863 - -0.0 4,957,057 + BWI76_RS23740 0.21 -0.0 4,957,198 + BWI76_RS23740 0.29 -0.1 4,957,208 + BWI76_RS23740 0.30 -1.4 4,957,315 - BWI76_RS23740 0.36 -1.5
Or see this region's nucleotide sequence