Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11005 and BWI76_RS11010 are separated by 229 nucleotides BWI76_RS11010 and BWI76_RS11015 are separated by 9 nucleotides BWI76_RS11015 and BWI76_RS11020 are separated by 2 nucleotides
BWI76_RS11005: BWI76_RS11005 - MFS transporter, at 2,320,908 to 2,322,116
_RS11005
BWI76_RS11010: BWI76_RS11010 - 30S ribosomal protein S5 alanine N-acetyltransferase, at 2,322,346 to 2,322,930
_RS11010
BWI76_RS11015: BWI76_RS11015 - hypothetical protein, at 2,322,940 to 2,323,587
_RS11015
BWI76_RS11020: BWI76_RS11020 - oxidoreductase family, NAD-binding protein, at 2,323,590 to 2,324,513
_RS11020
Position (kb)
2322
2323 Strain fitness (log2 ratio)
-1
0
1 at 2321.683 kb on - strand, within BWI76_RS11005 at 2321.731 kb on - strand, within BWI76_RS11005 at 2321.737 kb on + strand, within BWI76_RS11005 at 2321.965 kb on - strand, within BWI76_RS11005 at 2322.060 kb on + strand at 2322.119 kb on - strand at 2322.155 kb on - strand at 2322.298 kb on + strand at 2322.307 kb on - strand at 2322.512 kb on - strand, within BWI76_RS11010 at 2322.708 kb on - strand, within BWI76_RS11010 at 2322.751 kb on + strand, within BWI76_RS11010 at 2323.022 kb on - strand, within BWI76_RS11015 at 2323.042 kb on - strand, within BWI76_RS11015 at 2323.186 kb on - strand, within BWI76_RS11015 at 2323.889 kb on + strand, within BWI76_RS11020
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,321,683 - BWI76_RS11005 0.64 -0.0 2,321,731 - BWI76_RS11005 0.68 +0.0 2,321,737 + BWI76_RS11005 0.69 +0.4 2,321,965 - BWI76_RS11005 0.87 -0.9 2,322,060 + +0.8 2,322,119 - -0.2 2,322,155 - -0.5 2,322,298 + +0.3 2,322,307 - +0.1 2,322,512 - BWI76_RS11010 0.28 +0.7 2,322,708 - BWI76_RS11010 0.62 -0.3 2,322,751 + BWI76_RS11010 0.69 +0.0 2,323,022 - BWI76_RS11015 0.13 -0.5 2,323,042 - BWI76_RS11015 0.16 -0.4 2,323,186 - BWI76_RS11015 0.38 +0.0 2,323,889 + BWI76_RS11020 0.32 -0.0
Or see this region's nucleotide sequence