Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00110 and BWI76_RS00115 are separated by 164 nucleotides BWI76_RS00115 and BWI76_RS00120 are separated by 41 nucleotides BWI76_RS00120 and BWI76_RS00125 are separated by 54 nucleotides
BWI76_RS00110: BWI76_RS00110 - adenine permease PurP, at 20,859 to 22,199
_RS00110
BWI76_RS00115: BWI76_RS00115 - 6-phosphogluconate phosphatase, at 22,364 to 23,029
_RS00115
BWI76_RS00120: BWI76_RS00120 - glucosamine-6-phosphate deaminase, at 23,071 to 23,808
_RS00120
BWI76_RS00125: BWI76_RS00125 - putative xylanase, at 23,863 to 25,029
_RS00125
Position (kb)
23
24 Strain fitness (log2 ratio)
-1
0
1
2 at 22.121 kb on - strand at 22.125 kb on - strand at 22.130 kb on - strand at 22.416 kb on - strand at 22.506 kb on - strand, within BWI76_RS00115 at 22.559 kb on - strand, within BWI76_RS00115 at 22.675 kb on - strand at 22.686 kb on + strand, within BWI76_RS00115 at 22.694 kb on - strand, within BWI76_RS00115 at 22.854 kb on - strand, within BWI76_RS00115 at 22.890 kb on - strand, within BWI76_RS00115 at 23.039 kb on + strand at 23.076 kb on - strand at 23.081 kb on - strand at 23.133 kb on + strand at 23.170 kb on - strand, within BWI76_RS00120 at 23.386 kb on - strand, within BWI76_RS00120 at 23.386 kb on - strand, within BWI76_RS00120 at 23.448 kb on + strand, within BWI76_RS00120 at 23.562 kb on + strand, within BWI76_RS00120 at 23.636 kb on + strand, within BWI76_RS00120 at 23.705 kb on - strand, within BWI76_RS00120 at 23.732 kb on + strand, within BWI76_RS00120 at 23.743 kb on - strand at 23.846 kb on - strand at 23.997 kb on - strand, within BWI76_RS00125 at 23.998 kb on - strand, within BWI76_RS00125 at 24.203 kb on - strand, within BWI76_RS00125 at 24.237 kb on + strand, within BWI76_RS00125 at 24.312 kb on - strand, within BWI76_RS00125 at 24.317 kb on + strand, within BWI76_RS00125 at 24.710 kb on + strand, within BWI76_RS00125 at 24.750 kb on + strand, within BWI76_RS00125 at 24.787 kb on - strand, within BWI76_RS00125
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 22,121 - -0.3 22,125 - +0.8 22,130 - -0.2 22,416 - +0.7 22,506 - BWI76_RS00115 0.21 +0.3 22,559 - BWI76_RS00115 0.29 -0.8 22,675 - +2.3 22,686 + BWI76_RS00115 0.48 -0.4 22,694 - BWI76_RS00115 0.50 +0.2 22,854 - BWI76_RS00115 0.74 -0.2 22,890 - BWI76_RS00115 0.79 -0.7 23,039 + -0.7 23,076 - -1.0 23,081 - +0.3 23,133 + -0.1 23,170 - BWI76_RS00120 0.13 -0.7 23,386 - BWI76_RS00120 0.43 +1.6 23,386 - BWI76_RS00120 0.43 -1.4 23,448 + BWI76_RS00120 0.51 -0.9 23,562 + BWI76_RS00120 0.67 -0.6 23,636 + BWI76_RS00120 0.77 +0.3 23,705 - BWI76_RS00120 0.86 -0.7 23,732 + BWI76_RS00120 0.90 -1.3 23,743 - +0.8 23,846 - -0.1 23,997 - BWI76_RS00125 0.11 -0.2 23,998 - BWI76_RS00125 0.12 -0.1 24,203 - BWI76_RS00125 0.29 +0.1 24,237 + BWI76_RS00125 0.32 -0.1 24,312 - BWI76_RS00125 0.38 +0.1 24,317 + BWI76_RS00125 0.39 +0.2 24,710 + BWI76_RS00125 0.73 -0.2 24,750 + BWI76_RS00125 0.76 +0.4 24,787 - BWI76_RS00125 0.79 +1.3
Or see this region's nucleotide sequence