Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28860

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
6,278,852	+		AO353_28855	0.82	-0.0
6,278,853	-		AO353_28855	0.82	+1.4
6,278,895	+		AO353_28855	0.85	-0.3
6,278,896	-		AO353_28855	0.85	+0.8
6,278,991	+				-1.5
6,278,991	+				+2.3
6,278,992	-				+0.0
6,279,070	+				+0.5
6,279,074	+				-0.0
6,279,075	-				-0.0
6,279,075	-				-0.6
6,279,075	-				-1.9
6,279,075	-				-0.5
6,279,075	-				-0.4
6,279,126	-				+1.4
6,279,126	-				-2.8
6,279,218	+				-0.1
6,279,218	+				+0.1
6,279,218	+				-0.1
6,279,218	+				-0.1
6,279,218	+				-1.3
6,279,218	+				+1.4
6,279,218	+				+1.6
6,279,218	+				-0.2
6,279,218	+				-0.9
6,279,219	-				+0.4
6,279,219	-				+0.2
6,279,219	-				+1.0
6,279,219	-				+0.4
6,279,219	-				-0.5
6,279,219	-				-0.4
6,279,219	-				-2.3
6,279,219	-				-0.9
6,279,219	-				+0.3
6,279,219	-				+0.4
6,279,219	-				-0.1
6,279,219	-				+0.1
6,279,219	-				-1.4
6,279,222	+				+0.6
6,279,222	+				-1.7
6,279,223	-				-2.1
6,279,223	-				-0.4
6,279,223	-				-0.4
6,279,223	-				+0.1
6,279,225	+				+0.2
6,279,225	+				-1.1
6,279,225	+				+2.3
6,279,226	-				+1.0
6,279,226	-				+0.1
6,279,226	-				-0.8
6,279,231	+				-0.1
6,279,231	+				-0.9
6,279,231	+				+0.4
6,279,271	+				+0.0
6,279,271	+				-0.4
6,279,271	+				+0.7
6,279,271	+				-0.7
6,279,271	+				-0.5
6,279,271	+				-0.6
6,279,271	+				+1.4
6,279,272	-				-0.3
6,279,272	-				-1.1
6,279,272	-				-0.8
6,279,272	-				-0.8
6,279,272	-				+0.2
6,279,275	+				-1.6
6,279,275	+				+0.8
6,279,275	+				-0.9
6,279,275	+				-0.1
6,279,275	+				+0.9
6,279,275	+				-0.6
6,279,275	+				-0.9
6,279,275	+				+0.4
6,279,275	+				-2.4
6,279,275	+				-1.4
6,279,275	+				-0.1
6,279,276	-				-0.7
6,279,276	-				+0.4
6,279,276	-				+1.0
6,279,276	-				-0.2
6,279,276	-				-1.6
6,279,276	-				+0.4
6,279,276	-				+1.1
6,279,276	-				-0.5
6,279,276	-				+0.7
6,279,276	-				-0.8
6,279,276	-				+0.6
6,279,276	-				-0.1
6,279,276	-				+1.2
6,279,276	-				-1.5
6,279,311	-				+1.0
6,279,311	-				+0.4
6,279,324	+				-0.6
6,279,325	-				-1.1
6,279,371	+				+0.9
6,279,372	-				+0.6
6,279,372	-				-0.4
6,279,372	-				-0.9
6,279,375	+				-1.1
6,279,375	+				-0.2
6,279,375	+				-1.4
6,279,375	+				-1.0
6,279,375	+				-0.9
6,279,376	-				+0.8
6,279,376	-				+0.9
6,279,376	-				-2.3
6,279,376	-				-0.3
6,279,392	+				-0.7
6,279,392	+				+0.3
6,279,392	+				+0.3
6,279,392	+				+0.7
6,279,392	+				+1.1
6,279,392	+				-0.3
6,279,393	-				+0.7
6,279,393	-				-0.0
6,279,393	-				-1.2
6,279,393	-				-2.9
6,279,393	-				-0.2
6,279,393	-				-0.1
6,279,393	-				+0.0
6,279,436	+				+0.1
6,279,450	+				+0.6
6,279,450	+				+0.2
6,279,451	-				-1.9
6,279,613	+				+0.3
6,279,614	-				-0.3
6,279,637	+				-1.1
6,279,637	+				-0.1
6,279,637	+				+0.3
6,279,637	+				+2.2
6,279,637	+				-1.0
6,279,637	+				+0.3
6,279,637	+				-0.4
6,279,637	+				-1.7
6,279,637	+				-0.9
6,279,638	-				+0.1
6,279,638	-				+1.0
6,279,638	-				-0.7
6,279,638	-				-0.7
6,279,766	+				-0.5
6,279,766	+				-0.6
6,279,766	+				+1.2
6,279,766	+				+1.0
6,279,767	-				-0.8
6,279,767	-				-0.6
6,279,767	-				-0.1
6,279,767	-				-1.1
6,279,767	-				+0.6
6,279,767	-				+0.2
6,279,767	-				-0.6
6,279,805	+				-0.9
6,279,805	+				-0.6
6,279,834	-				+0.4
6,279,870	-				+0.4
6,279,927	+		AO353_28860	0.26	+0.3
6,279,927	+		AO353_28860	0.26	+0.9
6,279,927	+		AO353_28860	0.26	-0.4
6,279,928	-		AO353_28860	0.26	-0.3
6,279,938	+		AO353_28860	0.29	-1.4
6,279,938	+				+2.0
6,279,939	-		AO353_28860	0.29	-1.3
6,279,939	-		AO353_28860	0.29	-0.7
6,279,939	-		AO353_28860	0.29	-0.0
6,279,966	+		AO353_28860	0.38	-1.1
6,279,967	-		AO353_28860	0.38	+0.4
6,279,967	-		AO353_28860	0.38	+0.1
6,279,999	-		AO353_28860	0.48	-1.4
6,280,167	+				-0.1
6,280,167	+				-0.3
6,280,168	-				-1.1
6,280,168	-				-0.2
6,280,168	-				-0.1
6,280,197	-				+0.2
6,280,197	-				-0.8
6,280,266	-		AO353_28865	0.39	+0.6
6,280,266	-		AO353_28865	0.39	-1.3
6,280,383	+				+0.0
6,280,383	+				+1.0
6,280,383	+				+0.1
6,280,383	+				+0.1
6,280,383	+				+0.2
6,280,415	-				+0.4
6,280,415	-				+1.2
6,280,452	+				-0.3
6,280,501	-				-0.6
6,280,534	+				-1.7
6,280,534	+				+0.3
6,280,534	+				-0.7
6,280,534	+				-0.6
6,280,534	+				-1.4
6,280,535	-				+0.9
6,280,535	-				+0.8
6,280,568	+		AO353_28870	0.11	-0.1
6,280,568	+		AO353_28870	0.11	-1.1
6,280,574	+		AO353_28870	0.14	+0.2
6,280,575	-		AO353_28870	0.15	-0.1
6,280,575	-		AO353_28870	0.15	-0.6
6,280,575	-		AO353_28870	0.15	-0.8
6,280,593	+		AO353_28870	0.24	+0.4
6,280,593	+		AO353_28870	0.24	+0.3
6,280,593	+		AO353_28870	0.24	-1.9
6,280,594	-		AO353_28870	0.25	+1.3
6,280,594	-		AO353_28870	0.25	+1.0
6,280,594	-		AO353_28870	0.25	-0.9
6,280,594	-		AO353_28870	0.25	-0.3
6,280,662	+		AO353_28870	0.61	-1.0
6,280,712	+		AO353_28870	0.87	+1.0
6,280,712	+		AO353_28870	0.87	+0.9
6,280,712	+		AO353_28870	0.87	-0.6
6,280,713	-		AO353_28870	0.88	-0.4
6,280,713	-		AO353_28870	0.88	-1.1
6,280,713	-		AO353_28870	0.88	-1.1
6,280,713	-		AO353_28870	0.88	-0.4
6,280,713	-		AO353_28870	0.88	-0.1
6,280,721	+				+2.1
6,280,722	-				-0.6
6,280,722	-				-0.7
6,280,755	+				-0.1
6,280,756	-				+1.2
6,280,756	-				-1.7
6,280,771	+				-0.1
6,280,772	-				-0.5
6,280,772	-				+0.2
6,280,799	-				-0.1
6,280,799	-				+0.7
6,280,857	+				+0.2
6,280,857	+				-0.3
6,280,857	+				-0.1
6,280,858	-				+0.8
6,280,872	+				+0.2
6,280,873	-				-0.6
6,280,950	-				+0.0
6,280,950	-				-0.1
6,280,980	+				+0.1
6,280,980	+				+0.2
6,280,981	-				+0.0
6,281,021	+		AO353_28875	0.16	-0.4
6,281,021	+		AO353_28875	0.16	-0.4
6,281,022	-		AO353_28875	0.16	-1.1
6,281,022	-		AO353_28875	0.16	+0.2
6,281,022	-		AO353_28875	0.16	+0.4
6,281,030	+		AO353_28875	0.19	-1.4
6,281,042	+		AO353_28875	0.23	+0.5
6,281,043	-		AO353_28875	0.23	-0.6
6,281,057	-		AO353_28875	0.28	-0.6
6,281,057	-		AO353_28875	0.28	+0.1
6,281,057	-		AO353_28875	0.28	+0.3
6,281,057	-		AO353_28875	0.28	+0.3
6,281,057	-		AO353_28875	0.28	-0.3
6,281,057	-		AO353_28875	0.28	+1.7
6,281,057	-		AO353_28875	0.28	+1.1
6,281,060	-		AO353_28875	0.29	-0.4