Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22050

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,314,698	-				+0.8
1,314,718	-				-0.7
1,314,896	-				-0.3
1,315,084	+		ABZR87_RS22045	0.43	-1.0
1,315,084	+		ABZR87_RS22045	0.43	-0.6
1,315,084	+		ABZR87_RS22045	0.43	-0.5
1,315,084	+		ABZR87_RS22045	0.43	+1.5
1,315,084	+		ABZR87_RS22045	0.43	-1.3
1,315,084	+		ABZR87_RS22045	0.43	+0.0
1,315,084	+		ABZR87_RS22045	0.43	+0.6
1,315,085	-		ABZR87_RS22045	0.44	+3.4
1,315,085	-		ABZR87_RS22045	0.44	+0.5
1,315,085	-		ABZR87_RS22045	0.44	+1.2
1,315,085	-		ABZR87_RS22045	0.44	-1.8
1,315,112	-		ABZR87_RS22045	0.48	+2.4
1,315,112	-		ABZR87_RS22045	0.48	-0.6
1,315,141	+		ABZR87_RS22045	0.54	-1.3
1,315,141	+		ABZR87_RS22045	0.54	+0.7
1,315,142	-		ABZR87_RS22045	0.54	+1.0
1,315,142	-		ABZR87_RS22045	0.54	-1.9
1,315,183	+		ABZR87_RS22045	0.61	-0.2
1,315,183	+		ABZR87_RS22045	0.61	-0.7
1,315,183	+		ABZR87_RS22045	0.61	+1.9
1,315,183	+		ABZR87_RS22045	0.61	+0.4
1,315,183	+		ABZR87_RS22045	0.61	-1.8
1,315,183	+		ABZR87_RS22045	0.61	-1.0
1,315,183	+		ABZR87_RS22045	0.61	+2.6
1,315,183	+		ABZR87_RS22045	0.61	+0.3
1,315,183	+		ABZR87_RS22045	0.61	-1.9
1,315,184	-		ABZR87_RS22045	0.62	-0.5
1,315,184	-		ABZR87_RS22045	0.62	-1.0
1,315,184	-		ABZR87_RS22045	0.62	-1.3
1,315,184	-		ABZR87_RS22045	0.62	-2.3
1,315,184	-		ABZR87_RS22045	0.62	-0.9
1,315,184	-		ABZR87_RS22045	0.62	-0.4
1,315,184	-		ABZR87_RS22045	0.62	+1.5
1,315,184	-		ABZR87_RS22045	0.62	+1.4
1,315,184	-		ABZR87_RS22045	0.62	-0.5
1,315,271	+		ABZR87_RS22045	0.77	-0.0
1,315,271	+		ABZR87_RS22045	0.77	-1.8
1,315,272	-		ABZR87_RS22045	0.78	-2.1
1,315,288	+		ABZR87_RS22045	0.81	-0.3
1,315,288	+		ABZR87_RS22045	0.81	+0.7
1,315,289	-		ABZR87_RS22045	0.81	+4.3
1,315,292	+		ABZR87_RS22045	0.81	-0.1
1,315,293	-		ABZR87_RS22045	0.81	-1.6
1,315,293	-		ABZR87_RS22045	0.81	-1.7
1,315,301	+		ABZR87_RS22045	0.83	+1.7
1,315,370	+				+0.2
1,315,509	+				+1.0
1,315,691	+		ABZR87_RS22050	0.14	-1.2
1,315,692	-		ABZR87_RS22050	0.15	-0.7
1,315,692	-		ABZR87_RS22050	0.15	-2.4
1,315,751	+		ABZR87_RS22050	0.21	-2.1
1,315,752	-		ABZR87_RS22050	0.21	+0.2
1,315,752	-		ABZR87_RS22050	0.21	+0.2
1,315,804	-		ABZR87_RS22050	0.26	+2.7
1,315,961	+		ABZR87_RS22050	0.42	-1.9
1,315,962	-		ABZR87_RS22050	0.42	-0.7
1,316,103	+		ABZR87_RS22050	0.57	+1.2
1,316,103	+		ABZR87_RS22050	0.57	+0.5
1,316,103	+		ABZR87_RS22050	0.57	-0.3
1,316,103	+		ABZR87_RS22050	0.57	-1.4
1,316,104	-		ABZR87_RS22050	0.57	-0.7
1,316,104	-		ABZR87_RS22050	0.57	+0.4
1,316,104	-		ABZR87_RS22050	0.57	+0.3
1,316,104	-		ABZR87_RS22050	0.57	-1.9
1,316,104	-		ABZR87_RS22050	0.57	+0.4
1,316,104	-		ABZR87_RS22050	0.57	+0.4
1,316,105	+		ABZR87_RS22050	0.57	-0.1
1,316,105	+		ABZR87_RS22050	0.57	+0.1
1,316,105	+		ABZR87_RS22050	0.57	-0.7
1,316,105	+		ABZR87_RS22050	0.57	+0.8
1,316,105	+		ABZR87_RS22050	0.57	-1.8
1,316,105	+		ABZR87_RS22050	0.57	-0.6
1,316,105	+		ABZR87_RS22050	0.57	-0.9
1,316,105	+		ABZR87_RS22050	0.57	+1.2
1,316,105	+		ABZR87_RS22050	0.57	-0.3
1,316,105	+		ABZR87_RS22050	0.57	-2.2
1,316,106	-		ABZR87_RS22050	0.57	-1.3
1,316,106	-		ABZR87_RS22050	0.57	-0.4
1,316,106	-		ABZR87_RS22050	0.57	+0.6
1,316,106	-		ABZR87_RS22050	0.57	+0.2
1,316,106	-		ABZR87_RS22050	0.57	-0.2
1,316,106	-		ABZR87_RS22050	0.57	-0.4
1,316,106	-		ABZR87_RS22050	0.57	+1.4
1,316,106	-		ABZR87_RS22050	0.57	-1.5
1,316,106	-		ABZR87_RS22050	0.57	+0.6
1,316,109	+		ABZR87_RS22050	0.57	+2.4
1,316,110	-		ABZR87_RS22050	0.57	+1.1
1,316,110	-		ABZR87_RS22050	0.57	-1.7
1,316,110	-		ABZR87_RS22050	0.57	+1.8
1,316,250	+		ABZR87_RS22050	0.72	+0.4
1,316,250	+		ABZR87_RS22050	0.72	-0.9
1,316,251	-		ABZR87_RS22050	0.72	-1.2
1,316,251	-		ABZR87_RS22050	0.72	-0.5
1,316,282	+		ABZR87_RS22050	0.75	-0.6
1,316,282	+		ABZR87_RS22050	0.75	+0.1
1,316,282	+		ABZR87_RS22050	0.75	-1.0
1,316,282	+		ABZR87_RS22050	0.75	-1.2
1,316,282	+		ABZR87_RS22050	0.75	-1.0
1,316,283	-		ABZR87_RS22050	0.75	-1.3
1,316,283	-		ABZR87_RS22050	0.75	-0.6
1,316,283	-		ABZR87_RS22050	0.75	-0.2
1,316,283	-		ABZR87_RS22050	0.75	-0.3
1,316,283	-		ABZR87_RS22050	0.75	-0.7
1,316,345	+		ABZR87_RS22050	0.81	-1.6
1,316,345	+		ABZR87_RS22050	0.81	+0.1
1,316,345	+		ABZR87_RS22050	0.81	+0.1
1,316,345	+		ABZR87_RS22050	0.81	-0.1
1,316,345	+		ABZR87_RS22050	0.81	-1.2
1,316,346	-		ABZR87_RS22050	0.81	+1.4
1,316,346	-		ABZR87_RS22050	0.81	-0.6
1,316,346	-		ABZR87_RS22050	0.81	+0.2
1,316,463	-				-2.5
1,316,463	-				+3.1
1,316,481	+				+0.7
1,316,482	-				+0.1
1,316,605	+				+1.5
1,316,605	+				+0.8
1,316,606	-				-0.7
1,316,606	-				-1.2
1,316,609	+				+1.0
1,316,609	+				+0.1
1,316,609	+				+0.6
1,316,744	+				-0.5
1,316,745	-				+3.4
1,316,774	+				+1.3
1,316,774	+				+1.3
1,316,774	+				-0.7
1,316,775	-				-0.8
1,316,798	-				+0.5
1,316,798	-				-1.6
1,316,798	-				+1.6
1,316,856	+				+1.3
1,316,856	+				-0.3
1,316,857	-				+0.3
1,316,859	+				+0.3
1,316,883	+				-1.2
1,316,883	+				-0.5
1,317,522	+		ABZR87_RS22055	0.39	+0.9