Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS04915

Experiment: Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
1,030,299	+				+1.2
1,030,299	+				+0.9
1,030,300	-				-0.3
1,030,300	-				-0.6
1,030,300	-				+3.6
1,030,384	+				+0.2
1,030,400	+				-1.2
1,030,401	-				-0.4
1,030,786	+		ABZR87_RS04910	0.48	+1.6
1,030,786	+		ABZR87_RS04910	0.48	+1.7
1,030,786	+		ABZR87_RS04910	0.48	+0.1
1,030,786	+		ABZR87_RS04910	0.48	+0.3
1,030,787	-		ABZR87_RS04910	0.48	+1.5
1,030,787	-		ABZR87_RS04910	0.48	-1.3
1,030,787	-		ABZR87_RS04910	0.48	-0.9
1,030,787	-		ABZR87_RS04910	0.48	-0.6
1,030,795	+		ABZR87_RS04910	0.49	-1.7
1,030,795	+		ABZR87_RS04910	0.49	-0.2
1,030,795	+		ABZR87_RS04910	0.49	-0.1
1,030,796	-		ABZR87_RS04910	0.49	-1.1
1,030,796	-		ABZR87_RS04910	0.49	+0.6
1,030,945	+		ABZR87_RS04910	0.67	-1.3
1,030,945	+		ABZR87_RS04910	0.67	+0.2
1,030,946	-		ABZR87_RS04910	0.67	+0.7
1,030,946	-		ABZR87_RS04910	0.67	-0.8
1,030,946	-		ABZR87_RS04910	0.67	+1.7
1,031,214	+				-1.0
1,031,215	-				-0.7
1,031,215	-				+0.5
1,031,215	-				-0.4
1,031,368	-		ABZR87_RS04915	0.11	-0.7
1,031,403	-		ABZR87_RS04915	0.14	-2.1
1,031,403	-		ABZR87_RS04915	0.14	-1.3
1,031,403	-		ABZR87_RS04915	0.14	+0.1
1,031,646	+		ABZR87_RS04915	0.32	-1.0
1,031,646	+		ABZR87_RS04915	0.32	-0.3
1,031,646	+		ABZR87_RS04915	0.32	+0.1
1,031,646	+		ABZR87_RS04915	0.32	-1.8
1,031,646	+		ABZR87_RS04915	0.32	-1.7
1,031,646	+		ABZR87_RS04915	0.32	+0.8
1,031,647	-		ABZR87_RS04915	0.32	-0.1
1,031,647	-		ABZR87_RS04915	0.32	-1.2
1,031,647	-		ABZR87_RS04915	0.32	-2.1
1,031,647	-		ABZR87_RS04915	0.32	-0.2
1,031,647	-		ABZR87_RS04915	0.32	+0.5
1,031,647	-		ABZR87_RS04915	0.32	-1.5
1,031,647	-		ABZR87_RS04915	0.32	-0.2
1,031,806	-		ABZR87_RS04915	0.44	-1.3
1,031,892	+		ABZR87_RS04915	0.50	-0.9
1,031,892	+		ABZR87_RS04915	0.50	-1.1
1,031,892	+		ABZR87_RS04915	0.50	+2.9
1,031,892	+		ABZR87_RS04915	0.50	-0.5
1,031,893	-		ABZR87_RS04915	0.50	-0.7
1,031,893	-		ABZR87_RS04915	0.50	-0.5
1,032,018	+		ABZR87_RS04915	0.59	-0.7
1,032,018	+		ABZR87_RS04915	0.59	+0.5
1,032,018	+		ABZR87_RS04915	0.59	+0.4
1,032,018	+		ABZR87_RS04915	0.59	+1.3
1,032,018	+		ABZR87_RS04915	0.59	+0.5
1,032,018	+		ABZR87_RS04915	0.59	+0.5
1,032,018	+		ABZR87_RS04915	0.59	+3.1
1,032,018	+		ABZR87_RS04915	0.59	-1.9
1,032,018	+		ABZR87_RS04915	0.59	-0.4
1,032,018	+		ABZR87_RS04915	0.59	+1.3
1,032,019	-		ABZR87_RS04915	0.59	-1.6
1,032,019	-		ABZR87_RS04915	0.59	-1.2
1,032,019	-		ABZR87_RS04915	0.59	+4.3
1,032,019	-		ABZR87_RS04915	0.59	-1.7
1,032,019	-		ABZR87_RS04915	0.59	-0.6
1,032,019	-		ABZR87_RS04915	0.59	-1.5
1,032,019	-		ABZR87_RS04915	0.59	+0.2
1,032,055	-		ABZR87_RS04915	0.62	-1.7
1,032,060	+		ABZR87_RS04915	0.62	-1.0
1,032,060	+		ABZR87_RS04915	0.62	-0.5
1,032,060	+		ABZR87_RS04915	0.62	+4.9
1,032,060	+		ABZR87_RS04915	0.62	-1.7
1,032,060	+		ABZR87_RS04915	0.62	-0.1
1,032,061	-		ABZR87_RS04915	0.63	-0.1
1,032,061	-		ABZR87_RS04915	0.63	-0.5
1,032,061	-		ABZR87_RS04915	0.63	-0.4
1,032,162	+		ABZR87_RS04915	0.70	-0.4
1,032,162	+		ABZR87_RS04915	0.70	-1.3
1,032,162	+		ABZR87_RS04915	0.70	+2.4
1,032,163	-		ABZR87_RS04915	0.70	-1.6
1,032,163	-		ABZR87_RS04915	0.70	+1.4
1,032,163	-		ABZR87_RS04915	0.70	-0.5
1,032,187	-		ABZR87_RS04915	0.72	+1.0
1,032,187	-		ABZR87_RS04915	0.72	+4.8
1,032,187	-		ABZR87_RS04915	0.72	-1.3
1,032,219	+		ABZR87_RS04915	0.74	-0.7
1,032,219	+		ABZR87_RS04915	0.74	+0.4
1,032,220	-		ABZR87_RS04915	0.74	+0.9
1,032,220	-		ABZR87_RS04915	0.74	+1.4
1,032,220	-		ABZR87_RS04915	0.74	-1.0
1,032,276	+		ABZR87_RS04915	0.78	-0.2
1,032,276	+		ABZR87_RS04915	0.78	-0.3
1,032,276	+		ABZR87_RS04915	0.78	-0.5
1,032,276	+		ABZR87_RS04915	0.78	+0.3
1,032,276	+		ABZR87_RS04915	0.78	-0.1
1,032,277	-		ABZR87_RS04915	0.78	-0.5
1,032,277	-		ABZR87_RS04915	0.78	+0.9
1,032,277	-		ABZR87_RS04915	0.78	+1.0
1,032,278	+		ABZR87_RS04915	0.79	-0.4
1,032,278	+		ABZR87_RS04915	0.79	-1.6
1,032,278	+		ABZR87_RS04915	0.79	+0.2
1,032,278	+		ABZR87_RS04915	0.79	+2.7
1,032,279	-		ABZR87_RS04915	0.79	-1.2
1,032,279	-		ABZR87_RS04915	0.79	+0.7
1,032,279	-		ABZR87_RS04915	0.79	-1.2
1,032,279	-		ABZR87_RS04915	0.79	-0.9
1,032,279	-		ABZR87_RS04915	0.79	+1.6
1,032,279	-		ABZR87_RS04915	0.79	-1.1
1,032,279	-		ABZR87_RS04915	0.79	-0.3
1,032,279	-		ABZR87_RS04915	0.79	-0.9
1,032,279	-		ABZR87_RS04915	0.79	-0.2
1,032,367	-		ABZR87_RS04915	0.85	+0.6
1,032,462	+				+0.6
1,032,643	+				-0.8
1,032,643	+				-0.9
1,032,643	+				+0.5
1,032,643	+				+0.9
1,032,644	-				-0.2
1,032,644	-				-0.4
1,032,850	+		ABZR87_RS04920	0.29	-0.3
1,032,850	+		ABZR87_RS04920	0.29	+0.5
1,032,850	+		ABZR87_RS04920	0.29	+0.4
1,032,850	+		ABZR87_RS04920	0.29	-0.3
1,032,850	+		ABZR87_RS04920	0.29	+0.3
1,032,850	+		ABZR87_RS04920	0.29	-0.0
1,032,850	+		ABZR87_RS04920	0.29	+4.1
1,032,850	+		ABZR87_RS04920	0.29	+0.4
1,032,850	+		ABZR87_RS04920	0.29	-1.4
1,032,851	-		ABZR87_RS04920	0.29	+0.5
1,032,851	-		ABZR87_RS04920	0.29	-0.4
1,032,851	-		ABZR87_RS04920	0.29	-1.7
1,032,851	-		ABZR87_RS04920	0.29	+1.7
1,032,851	-		ABZR87_RS04920	0.29	+1.9
1,032,851	-		ABZR87_RS04920	0.29	-2.1
1,032,851	-		ABZR87_RS04920	0.29	+1.6
1,032,851	-		ABZR87_RS04920	0.29	+1.6
1,032,851	-		ABZR87_RS04920	0.29	-0.1
1,032,853	-		ABZR87_RS04920	0.29	+0.5
1,032,880	+		ABZR87_RS04920	0.32	-0.4
1,032,881	-		ABZR87_RS04920	0.33	+1.2
1,032,881	-		ABZR87_RS04920	0.33	+0.0
1,032,910	+		ABZR87_RS04920	0.36	+0.4
1,032,910	+		ABZR87_RS04920	0.36	-1.7
1,033,030	+		ABZR87_RS04920	0.49	-1.0
1,033,031	-		ABZR87_RS04920	0.49	+0.1
1,033,242	-		ABZR87_RS04920	0.72	+1.5