Experiment: Chloride 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_881 and Pf6N2E2_882 are separated by 148 nucleotides Pf6N2E2_882 and Pf6N2E2_883 are separated by 31 nucleotides
Pf6N2E2_881 - Aldoxime dehydratase, at 1,030,363 to 1,031,418
_881
Pf6N2E2_882 - FIG00961517: hypothetical protein, at 1,031,567 to 1,032,928
_882
Pf6N2E2_883 - Major myo-inositol transporter IolT, at 1,032,960 to 1,034,378
_883
Position (kb)
1031
1032
1033 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1030.589 kb on + strand, within Pf6N2E2_881 at 1030.646 kb on + strand, within Pf6N2E2_881 at 1030.646 kb on + strand, within Pf6N2E2_881 at 1030.721 kb on + strand, within Pf6N2E2_881 at 1030.722 kb on - strand, within Pf6N2E2_881 at 1030.881 kb on + strand, within Pf6N2E2_881 at 1030.882 kb on - strand, within Pf6N2E2_881 at 1030.882 kb on - strand, within Pf6N2E2_881 at 1030.882 kb on - strand, within Pf6N2E2_881 at 1030.985 kb on + strand, within Pf6N2E2_881 at 1030.985 kb on + strand, within Pf6N2E2_881 at 1030.986 kb on - strand, within Pf6N2E2_881 at 1030.986 kb on - strand, within Pf6N2E2_881 at 1030.986 kb on - strand, within Pf6N2E2_881 at 1031.095 kb on + strand, within Pf6N2E2_881 at 1031.096 kb on - strand, within Pf6N2E2_881 at 1031.096 kb on - strand, within Pf6N2E2_881 at 1031.174 kb on + strand, within Pf6N2E2_881 at 1031.175 kb on - strand, within Pf6N2E2_881 at 1031.228 kb on + strand, within Pf6N2E2_881 at 1031.229 kb on - strand, within Pf6N2E2_881 at 1031.285 kb on + strand, within Pf6N2E2_881 at 1031.286 kb on - strand, within Pf6N2E2_881 at 1031.462 kb on + strand at 1031.462 kb on + strand at 1031.462 kb on + strand at 1031.463 kb on - strand at 1031.463 kb on - strand at 1031.537 kb on - strand at 1031.543 kb on + strand at 1031.543 kb on + strand at 1031.543 kb on + strand at 1031.543 kb on + strand at 1031.544 kb on - strand at 1031.544 kb on - strand at 1031.581 kb on + strand at 1031.755 kb on - strand, within Pf6N2E2_882 at 1031.855 kb on + strand, within Pf6N2E2_882 at 1031.855 kb on + strand, within Pf6N2E2_882 at 1031.859 kb on + strand, within Pf6N2E2_882 at 1032.012 kb on - strand, within Pf6N2E2_882 at 1032.186 kb on - strand, within Pf6N2E2_882 at 1032.320 kb on + strand, within Pf6N2E2_882 at 1032.320 kb on + strand, within Pf6N2E2_882 at 1032.321 kb on - strand, within Pf6N2E2_882 at 1032.358 kb on + strand, within Pf6N2E2_882 at 1032.359 kb on - strand, within Pf6N2E2_882 at 1032.638 kb on + strand, within Pf6N2E2_882 at 1032.639 kb on - strand, within Pf6N2E2_882 at 1032.908 kb on - strand at 1032.908 kb on - strand at 1032.908 kb on - strand at 1032.967 kb on + strand at 1032.968 kb on - strand at 1032.968 kb on - strand at 1032.968 kb on - strand at 1032.968 kb on - strand at 1032.968 kb on - strand at 1033.460 kb on + strand, within Pf6N2E2_883 at 1033.461 kb on - strand, within Pf6N2E2_883 at 1033.505 kb on - strand, within Pf6N2E2_883 at 1033.505 kb on - strand, within Pf6N2E2_883 at 1033.539 kb on - strand, within Pf6N2E2_883 at 1033.670 kb on - strand, within Pf6N2E2_883 at 1033.670 kb on - strand, within Pf6N2E2_883 at 1033.673 kb on - strand, within Pf6N2E2_883 at 1033.756 kb on + strand, within Pf6N2E2_883 at 1033.756 kb on + strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883 at 1033.757 kb on - strand, within Pf6N2E2_883
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 0.5 M remove 1,030,589 + Pf6N2E2_881 0.21 -0.0 1,030,646 + Pf6N2E2_881 0.27 +0.1 1,030,646 + Pf6N2E2_881 0.27 +1.1 1,030,721 + Pf6N2E2_881 0.34 -0.2 1,030,722 - Pf6N2E2_881 0.34 +0.3 1,030,881 + Pf6N2E2_881 0.49 +2.1 1,030,882 - Pf6N2E2_881 0.49 +0.1 1,030,882 - Pf6N2E2_881 0.49 +0.8 1,030,882 - Pf6N2E2_881 0.49 -1.2 1,030,985 + Pf6N2E2_881 0.59 -0.1 1,030,985 + Pf6N2E2_881 0.59 -1.2 1,030,986 - Pf6N2E2_881 0.59 -0.5 1,030,986 - Pf6N2E2_881 0.59 -0.7 1,030,986 - Pf6N2E2_881 0.59 -0.5 1,031,095 + Pf6N2E2_881 0.69 -0.6 1,031,096 - Pf6N2E2_881 0.69 -0.8 1,031,096 - Pf6N2E2_881 0.69 +0.3 1,031,174 + Pf6N2E2_881 0.77 +0.8 1,031,175 - Pf6N2E2_881 0.77 +0.3 1,031,228 + Pf6N2E2_881 0.82 -0.3 1,031,229 - Pf6N2E2_881 0.82 -1.3 1,031,285 + Pf6N2E2_881 0.87 +2.1 1,031,286 - Pf6N2E2_881 0.87 +0.3 1,031,462 + +0.3 1,031,462 + +1.2 1,031,462 + +1.7 1,031,463 - -0.5 1,031,463 - -0.9 1,031,537 - +0.6 1,031,543 + -0.5 1,031,543 + +0.9 1,031,543 + +0.4 1,031,543 + +0.2 1,031,544 - +0.1 1,031,544 - +0.3 1,031,581 + -0.9 1,031,755 - Pf6N2E2_882 0.14 -1.7 1,031,855 + Pf6N2E2_882 0.21 +1.7 1,031,855 + Pf6N2E2_882 0.21 +0.1 1,031,859 + Pf6N2E2_882 0.21 -0.8 1,032,012 - Pf6N2E2_882 0.33 -0.3 1,032,186 - Pf6N2E2_882 0.45 -0.2 1,032,320 + Pf6N2E2_882 0.55 -0.7 1,032,320 + Pf6N2E2_882 0.55 -0.9 1,032,321 - Pf6N2E2_882 0.55 -1.3 1,032,358 + Pf6N2E2_882 0.58 +0.8 1,032,359 - Pf6N2E2_882 0.58 -0.9 1,032,638 + Pf6N2E2_882 0.79 -1.5 1,032,639 - Pf6N2E2_882 0.79 -0.9 1,032,908 - -1.2 1,032,908 - -0.0 1,032,908 - -2.3 1,032,967 + -0.5 1,032,968 - +0.5 1,032,968 - +0.9 1,032,968 - +1.5 1,032,968 - +0.1 1,032,968 - +1.2 1,033,460 + Pf6N2E2_883 0.35 +0.5 1,033,461 - Pf6N2E2_883 0.35 +0.7 1,033,505 - Pf6N2E2_883 0.38 +1.1 1,033,505 - Pf6N2E2_883 0.38 -0.7 1,033,539 - Pf6N2E2_883 0.41 -0.2 1,033,670 - Pf6N2E2_883 0.50 -0.0 1,033,670 - Pf6N2E2_883 0.50 +0.7 1,033,673 - Pf6N2E2_883 0.50 -0.8 1,033,756 + Pf6N2E2_883 0.56 -0.9 1,033,756 + Pf6N2E2_883 0.56 -0.3 1,033,757 - Pf6N2E2_883 0.56 +0.1 1,033,757 - Pf6N2E2_883 0.56 +0.1 1,033,757 - Pf6N2E2_883 0.56 -0.3 1,033,757 - Pf6N2E2_883 0.56 +0.7 1,033,757 - Pf6N2E2_883 0.56 -1.0 1,033,757 - Pf6N2E2_883 0.56 +1.7
Or see this region's nucleotide sequence