Experiment: Chloride 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_810 and Pf6N2E2_811 are separated by 340 nucleotides Pf6N2E2_811 and Pf6N2E2_812 are separated by 70 nucleotides
Pf6N2E2_810 - Various polyols ABC transporter, periplasmic substrate-binding protein, at 942,259 to 943,569
_810
Pf6N2E2_811 - Transcriptional regulator of various polyols utilization, AraC family, at 943,910 to 944,815
_811
Pf6N2E2_812 - Glycosyltransferase, at 944,886 to 946,178
_812
Position (kb) 943
944
945 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 943.037 kb on + strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810 at 943.038 kb on - strand, within Pf6N2E2_810 at 943.148 kb on + strand, within Pf6N2E2_810 at 943.149 kb on - strand, within Pf6N2E2_810 at 943.149 kb on - strand, within Pf6N2E2_810 at 943.149 kb on - strand, within Pf6N2E2_810 at 943.169 kb on + strand, within Pf6N2E2_810 at 943.170 kb on - strand, within Pf6N2E2_810 at 943.307 kb on + strand, within Pf6N2E2_810 at 943.308 kb on - strand, within Pf6N2E2_810 at 943.308 kb on - strand, within Pf6N2E2_810 at 943.612 kb on + strand at 943.612 kb on + strand at 943.613 kb on - strand at 943.613 kb on - strand at 943.613 kb on - strand at 943.658 kb on - strand at 943.841 kb on + strand at 943.841 kb on + strand at 943.843 kb on + strand at 943.844 kb on - strand at 944.053 kb on + strand, within Pf6N2E2_811 at 944.053 kb on + strand, within Pf6N2E2_811 at 944.053 kb on + strand, within Pf6N2E2_811 at 944.054 kb on - strand, within Pf6N2E2_811 at 944.154 kb on + strand, within Pf6N2E2_811 at 944.154 kb on + strand, within Pf6N2E2_811 at 944.154 kb on + strand, within Pf6N2E2_811 at 944.155 kb on - strand, within Pf6N2E2_811 at 944.212 kb on - strand, within Pf6N2E2_811 at 944.227 kb on - strand, within Pf6N2E2_811 at 944.304 kb on + strand, within Pf6N2E2_811 at 944.486 kb on + strand, within Pf6N2E2_811 at 944.581 kb on + strand, within Pf6N2E2_811 at 944.622 kb on + strand, within Pf6N2E2_811 at 944.623 kb on - strand, within Pf6N2E2_811 at 944.637 kb on + strand, within Pf6N2E2_811 at 944.638 kb on - strand, within Pf6N2E2_811 at 944.638 kb on - strand, within Pf6N2E2_811 at 944.688 kb on + strand, within Pf6N2E2_811 at 944.742 kb on + strand at 944.742 kb on + strand at 944.761 kb on + strand at 944.761 kb on + strand at 944.781 kb on + strand at 944.781 kb on + strand at 944.781 kb on + strand at 944.807 kb on - strand at 944.831 kb on - strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 945.118 kb on + strand, within Pf6N2E2_812 at 945.118 kb on + strand, within Pf6N2E2_812 at 945.119 kb on - strand, within Pf6N2E2_812 at 945.119 kb on - strand, within Pf6N2E2_812 at 945.119 kb on - strand, within Pf6N2E2_812 at 945.369 kb on - strand, within Pf6N2E2_812 at 945.397 kb on + strand, within Pf6N2E2_812 at 945.398 kb on - strand, within Pf6N2E2_812 at 945.398 kb on - strand, within Pf6N2E2_812 at 945.398 kb on - strand, within Pf6N2E2_812 at 945.407 kb on - strand, within Pf6N2E2_812
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 0.5 M remove 943,037 + Pf6N2E2_810 0.59 -1.1 943,038 - Pf6N2E2_810 0.59 -1.9 943,038 - Pf6N2E2_810 0.59 -0.1 943,038 - Pf6N2E2_810 0.59 +2.1 943,148 + Pf6N2E2_810 0.68 -0.4 943,149 - Pf6N2E2_810 0.68 +0.1 943,149 - Pf6N2E2_810 0.68 +0.9 943,149 - Pf6N2E2_810 0.68 -0.2 943,169 + Pf6N2E2_810 0.69 -0.8 943,170 - Pf6N2E2_810 0.69 -0.7 943,307 + Pf6N2E2_810 0.80 +0.2 943,308 - Pf6N2E2_810 0.80 -1.2 943,308 - Pf6N2E2_810 0.80 -0.4 943,612 + +0.6 943,612 + +1.1 943,613 - +1.6 943,613 - -0.7 943,613 - +1.1 943,658 - -1.5 943,841 + -1.5 943,841 + -0.7 943,843 + -0.5 943,844 - +0.6 944,053 + Pf6N2E2_811 0.16 -0.5 944,053 + Pf6N2E2_811 0.16 +0.6 944,053 + Pf6N2E2_811 0.16 -1.2 944,054 - Pf6N2E2_811 0.16 +0.9 944,154 + Pf6N2E2_811 0.27 -0.4 944,154 + Pf6N2E2_811 0.27 -2.1 944,154 + Pf6N2E2_811 0.27 -0.6 944,155 - Pf6N2E2_811 0.27 -0.8 944,212 - Pf6N2E2_811 0.33 -1.2 944,227 - Pf6N2E2_811 0.35 +0.6 944,304 + Pf6N2E2_811 0.43 -0.1 944,486 + Pf6N2E2_811 0.64 +0.1 944,581 + Pf6N2E2_811 0.74 -0.4 944,622 + Pf6N2E2_811 0.79 -0.4 944,623 - Pf6N2E2_811 0.79 +0.2 944,637 + Pf6N2E2_811 0.80 +0.6 944,638 - Pf6N2E2_811 0.80 +0.3 944,638 - Pf6N2E2_811 0.80 +0.9 944,688 + Pf6N2E2_811 0.86 -0.4 944,742 + +1.6 944,742 + -0.0 944,761 + -0.5 944,761 + +1.1 944,781 + -0.4 944,781 + +0.4 944,781 + +1.5 944,807 - +1.1 944,831 - +0.4 944,926 + +0.2 944,926 + -0.3 944,926 + +0.5 944,926 + -1.5 944,926 + -0.1 944,926 + +0.1 944,926 + -0.0 944,926 + +0.2 944,926 + +0.6 944,926 + +0.1 944,926 + -0.6 944,926 + +0.4 944,926 + -0.9 944,927 - +0.4 944,927 - -0.4 944,927 - +0.9 944,927 - -0.4 944,927 - +0.4 944,927 - +0.7 944,927 - +0.2 944,927 - -0.8 944,927 - +0.6 944,927 - -1.3 944,927 - +0.9 945,118 + Pf6N2E2_812 0.18 +1.1 945,118 + Pf6N2E2_812 0.18 -0.7 945,119 - Pf6N2E2_812 0.18 -1.5 945,119 - Pf6N2E2_812 0.18 -1.7 945,119 - Pf6N2E2_812 0.18 -1.9 945,369 - Pf6N2E2_812 0.37 -2.9 945,397 + Pf6N2E2_812 0.40 -0.9 945,398 - Pf6N2E2_812 0.40 -0.6 945,398 - Pf6N2E2_812 0.40 +0.2 945,398 - Pf6N2E2_812 0.40 +1.1 945,407 - Pf6N2E2_812 0.40 -0.4
Or see this region's nucleotide sequence