Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3330

Experiment: Chloride 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 0.5 M
3,849,888	+				-0.3
3,850,060	+		Pf6N2E2_3329	0.16	+0.1
3,850,060	+		Pf6N2E2_3329	0.16	+0.4
3,850,060	+		Pf6N2E2_3329	0.16	-1.6
3,850,061	-		Pf6N2E2_3329	0.16	+1.2
3,850,069	-		Pf6N2E2_3329	0.18	-0.9
3,850,071	-		Pf6N2E2_3329	0.19	+1.0
3,850,071	-		Pf6N2E2_3329	0.19	+0.9
3,850,071	-		Pf6N2E2_3329	0.19	+1.6
3,850,194	+		Pf6N2E2_3329	0.54	-0.5
3,850,195	-		Pf6N2E2_3329	0.54	-0.2
3,850,368	-				-0.4
3,850,368	-				-0.9
3,850,368	-				+0.7
3,850,368	-				+0.5
3,850,397	+				-0.1
3,850,399	+				-0.1
3,850,530	+				-0.9
3,850,530	+				-0.1
3,850,530	+				-1.0
3,850,531	-				+0.1
3,850,634	+				+2.9
3,850,670	+				-2.3
3,850,702	+				-0.3
3,850,702	+				-0.3
3,850,703	-				-0.6
3,850,703	-				-1.4
3,850,906	+		Pf6N2E2_3330	0.12	-0.3
3,850,907	-		Pf6N2E2_3330	0.12	-1.0
3,850,919	+		Pf6N2E2_3330	0.14	-2.4
3,850,919	+		Pf6N2E2_3330	0.14	-1.0
3,850,940	+		Pf6N2E2_3330	0.17	-0.4
3,850,940	+		Pf6N2E2_3330	0.17	-1.3
3,850,940	+		Pf6N2E2_3330	0.17	-0.2
3,850,941	-		Pf6N2E2_3330	0.17	-1.3
3,850,941	-		Pf6N2E2_3330	0.17	-0.7
3,851,195	+		Pf6N2E2_3330	0.52	-0.8
3,851,195	+		Pf6N2E2_3330	0.52	-0.7
3,851,195	+		Pf6N2E2_3330	0.52	-1.4
3,851,195	+		Pf6N2E2_3330	0.52	-1.4
3,851,195	+		Pf6N2E2_3330	0.52	+0.1
3,851,195	+		Pf6N2E2_3330	0.52	-2.9
3,851,196	-		Pf6N2E2_3330	0.52	+0.6
3,851,196	-		Pf6N2E2_3330	0.52	-1.0
3,851,196	-		Pf6N2E2_3330	0.52	-2.1
3,851,196	-		Pf6N2E2_3330	0.52	-3.5
3,851,196	-		Pf6N2E2_3330	0.52	-1.9
3,851,196	-		Pf6N2E2_3330	0.52	-3.1
3,851,196	-		Pf6N2E2_3330	0.52	-0.6
3,851,196	-		Pf6N2E2_3330	0.52	-0.4
3,851,196	-		Pf6N2E2_3330	0.52	-2.3
3,851,196	-		Pf6N2E2_3330	0.52	-0.1
3,851,196	-		Pf6N2E2_3330	0.52	-0.2
3,851,534	+				-2.6
3,851,534	+				+0.1
3,851,535	-				+0.4
3,851,535	-				-1.8
3,851,561	+				-0.6
3,851,561	+				-0.2
3,851,581	+				-2.1
3,851,697	+		Pf6N2E2_3331	0.15	-2.4
3,851,698	-		Pf6N2E2_3331	0.15	-1.9
3,851,698	-		Pf6N2E2_3331	0.15	-1.6
3,851,715	+		Pf6N2E2_3331	0.17	-1.9
3,851,715	+		Pf6N2E2_3331	0.17	-1.3
3,851,715	+		Pf6N2E2_3331	0.17	+0.2
3,851,799	+		Pf6N2E2_3331	0.26	-1.7
3,851,823	+		Pf6N2E2_3331	0.29	-0.2
3,851,823	+		Pf6N2E2_3331	0.29	-2.9
3,851,824	-		Pf6N2E2_3331	0.29	+0.6
3,851,862	+		Pf6N2E2_3331	0.33	-0.9
3,851,934	+		Pf6N2E2_3331	0.41	-1.6
3,851,934	+		Pf6N2E2_3331	0.41	-3.2
3,851,934	+		Pf6N2E2_3331	0.41	-0.4
3,851,934	+		Pf6N2E2_3331	0.41	-2.9
3,851,935	-		Pf6N2E2_3331	0.41	-2.0
3,851,935	-		Pf6N2E2_3331	0.41	+0.6
3,851,935	-		Pf6N2E2_3331	0.41	-3.0
3,851,935	-		Pf6N2E2_3331	0.41	-1.1
3,851,935	-		Pf6N2E2_3331	0.41	-2.3
3,852,153	+		Pf6N2E2_3331	0.65	-0.3
3,852,154	-		Pf6N2E2_3331	0.66	-1.6
3,852,195	+		Pf6N2E2_3331	0.70	-2.7
3,852,195	+		Pf6N2E2_3331	0.70	-1.8
3,852,195	+		Pf6N2E2_3331	0.70	-0.1
3,852,195	+		Pf6N2E2_3331	0.70	-1.2
3,852,196	-		Pf6N2E2_3331	0.70	+0.1
3,852,255	+		Pf6N2E2_3331	0.77	+1.3
3,852,255	+		Pf6N2E2_3331	0.77	-2.4
3,852,255	+		Pf6N2E2_3331	0.77	-1.9
3,852,255	+		Pf6N2E2_3331	0.77	-0.1
3,852,255	+		Pf6N2E2_3331	0.77	-1.6
3,852,255	+		Pf6N2E2_3331	0.77	+0.9
3,852,255	+		Pf6N2E2_3331	0.77	-0.2
3,852,255	+		Pf6N2E2_3331	0.77	-0.3
3,852,255	+		Pf6N2E2_3331	0.77	-0.0
3,852,255	+		Pf6N2E2_3331	0.77	-2.4
3,852,256	-		Pf6N2E2_3331	0.77	-1.2
3,852,256	-		Pf6N2E2_3331	0.77	+1.9
3,852,256	-		Pf6N2E2_3331	0.77	-1.2
3,852,256	-		Pf6N2E2_3331	0.77	-2.0
3,852,256	-		Pf6N2E2_3331	0.77	-0.7
3,852,256	-		Pf6N2E2_3331	0.77	-0.7
3,852,297	+		Pf6N2E2_3331	0.81	-1.5
3,852,298	-		Pf6N2E2_3331	0.82	-0.7