Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS23135

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
5,309,788	-		HSERO_RS23130	0.22	+0.6
5,309,909	-		HSERO_RS23130	0.32	+0.5
5,309,919	+		HSERO_RS23130	0.33	+0.7
5,309,936	-		HSERO_RS23130	0.34	-1.9
5,309,975	+		HSERO_RS23130	0.37	-0.9
5,309,975	+		HSERO_RS23130	0.37	+0.1
5,309,985	+		HSERO_RS23130	0.38	+0.3
5,309,993	-		HSERO_RS23130	0.39	-0.1
5,310,133	-		HSERO_RS23130	0.50	-0.3
5,310,213	+		HSERO_RS23130	0.57	+0.5
5,310,476	-		HSERO_RS23130	0.78	-1.9
5,310,884	+		HSERO_RS23135	0.41	+0.2
5,310,892	-		HSERO_RS23135	0.43	-0.9
5,310,892	-		HSERO_RS23135	0.43	+1.5
5,311,027	+		HSERO_RS23135	0.82	+1.0
5,311,041	-		HSERO_RS23135	0.86	-1.0
5,311,044	-		HSERO_RS23135	0.87	+1.0
5,311,209	-				-0.2
5,311,261	-		HSERO_RS23140	0.10	-0.5
5,311,266	-		HSERO_RS23140	0.11	-0.6
5,311,338	-		HSERO_RS23140	0.21	+0.9
5,311,350	-		HSERO_RS23140	0.23	+0.1
5,311,368	-		HSERO_RS23140	0.25	-0.1
5,311,405	-		HSERO_RS23140	0.30	-0.8
5,311,415	-		HSERO_RS23140	0.32	-0.2
5,311,522	-		HSERO_RS23140	0.46	-0.0
5,311,559	+		HSERO_RS23140	0.52	-0.3
5,311,618	+		HSERO_RS23140	0.60	+0.2
5,311,733	-		HSERO_RS23140	0.76	+0.3
5,311,785	-		HSERO_RS23140	0.83	-0.0
5,311,806	+		HSERO_RS23140	0.86	-0.9
5,311,826	+		HSERO_RS23140	0.89	-0.2
5,311,838	+				-0.8
5,311,853	+				-0.0
5,311,903	+				-0.1
5,311,916	+				+0.1
5,311,916	+				-0.3
5,311,923	+				+0.1
5,311,960	-				-0.1