Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22095 and HSERO_RS22100 are separated by 652 nucleotides HSERO_RS22100 and HSERO_RS22105 overlap by 4 nucleotides
HSERO_RS22095: HSERO_RS22095 - hypothetical protein, at 5,049,861 to 5,050,388
_RS22095
HSERO_RS22100: HSERO_RS22100 - hypothetical protein, at 5,051,041 to 5,052,012
_RS22100
HSERO_RS22105: HSERO_RS22105 - glycosyl transferase, at 5,052,009 to 5,053,058
_RS22105
Position (kb) 5051
5052
5053 Strain fitness (log2 ratio) -1
0
1
2 at 5050.116 kb on - strand, within HSERO_RS22095 at 5050.160 kb on + strand at 5050.222 kb on + strand, within HSERO_RS22095 at 5050.369 kb on - strand at 5050.408 kb on - strand at 5050.438 kb on - strand at 5050.528 kb on - strand at 5051.029 kb on + strand at 5051.037 kb on - strand at 5051.042 kb on - strand at 5051.183 kb on - strand, within HSERO_RS22100 at 5051.285 kb on + strand, within HSERO_RS22100 at 5051.293 kb on - strand, within HSERO_RS22100 at 5051.349 kb on - strand, within HSERO_RS22100 at 5051.430 kb on - strand, within HSERO_RS22100 at 5051.470 kb on + strand, within HSERO_RS22100 at 5051.514 kb on - strand, within HSERO_RS22100 at 5051.521 kb on - strand, within HSERO_RS22100 at 5051.637 kb on - strand, within HSERO_RS22100 at 5051.772 kb on - strand, within HSERO_RS22100 at 5051.816 kb on + strand, within HSERO_RS22100 at 5051.843 kb on + strand, within HSERO_RS22100 at 5051.866 kb on - strand, within HSERO_RS22100 at 5051.866 kb on - strand, within HSERO_RS22100 at 5051.868 kb on + strand, within HSERO_RS22100 at 5051.932 kb on - strand at 5051.934 kb on + strand at 5051.973 kb on - strand at 5052.049 kb on + strand at 5052.332 kb on + strand, within HSERO_RS22105 at 5052.332 kb on + strand, within HSERO_RS22105 at 5052.506 kb on - strand, within HSERO_RS22105 at 5052.545 kb on + strand, within HSERO_RS22105 at 5052.545 kb on + strand, within HSERO_RS22105 at 5052.553 kb on - strand at 5052.594 kb on - strand, within HSERO_RS22105 at 5052.668 kb on - strand, within HSERO_RS22105 at 5052.683 kb on - strand, within HSERO_RS22105 at 5052.726 kb on + strand, within HSERO_RS22105 at 5052.748 kb on + strand, within HSERO_RS22105 at 5052.764 kb on + strand, within HSERO_RS22105 at 5052.774 kb on + strand, within HSERO_RS22105 at 5052.860 kb on - strand, within HSERO_RS22105 at 5052.866 kb on + strand, within HSERO_RS22105 at 5052.980 kb on - strand at 5053.007 kb on - strand at 5053.007 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 5,050,116 - HSERO_RS22095 0.48 +0.2 5,050,160 + -0.7 5,050,222 + HSERO_RS22095 0.68 +0.7 5,050,369 - +0.3 5,050,408 - -0.0 5,050,438 - +0.5 5,050,528 - +0.3 5,051,029 + +0.4 5,051,037 - +1.9 5,051,042 - -0.2 5,051,183 - HSERO_RS22100 0.15 +0.2 5,051,285 + HSERO_RS22100 0.25 +1.3 5,051,293 - HSERO_RS22100 0.26 +0.4 5,051,349 - HSERO_RS22100 0.32 +0.3 5,051,430 - HSERO_RS22100 0.40 +0.4 5,051,470 + HSERO_RS22100 0.44 +1.4 5,051,514 - HSERO_RS22100 0.49 -0.2 5,051,521 - HSERO_RS22100 0.49 +0.5 5,051,637 - HSERO_RS22100 0.61 +0.6 5,051,772 - HSERO_RS22100 0.75 +0.2 5,051,816 + HSERO_RS22100 0.80 +1.7 5,051,843 + HSERO_RS22100 0.83 +0.7 5,051,866 - HSERO_RS22100 0.85 +0.0 5,051,866 - HSERO_RS22100 0.85 +0.7 5,051,868 + HSERO_RS22100 0.85 +0.1 5,051,932 - +0.3 5,051,934 + +0.6 5,051,973 - +0.7 5,052,049 + +0.4 5,052,332 + HSERO_RS22105 0.31 +0.1 5,052,332 + HSERO_RS22105 0.31 +0.1 5,052,506 - HSERO_RS22105 0.47 +1.7 5,052,545 + HSERO_RS22105 0.51 +0.1 5,052,545 + HSERO_RS22105 0.51 +0.1 5,052,553 - -0.1 5,052,594 - HSERO_RS22105 0.56 +0.5 5,052,668 - HSERO_RS22105 0.63 -0.1 5,052,683 - HSERO_RS22105 0.64 -0.0 5,052,726 + HSERO_RS22105 0.68 +0.4 5,052,748 + HSERO_RS22105 0.70 +0.4 5,052,764 + HSERO_RS22105 0.72 +1.0 5,052,774 + HSERO_RS22105 0.73 +0.1 5,052,860 - HSERO_RS22105 0.81 +0.3 5,052,866 + HSERO_RS22105 0.82 +0.5 5,052,980 - +0.2 5,053,007 - -0.4 5,053,007 - -0.2
Or see this region's nucleotide sequence