Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22095

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
5,049,087	-		HSERO_RS22090	0.42	-0.4
5,049,151	-		HSERO_RS22090	0.47	+0.4
5,049,160	+				-0.7
5,049,232	+		HSERO_RS22090	0.54	-0.3
5,049,298	-		HSERO_RS22090	0.60	-0.3
5,049,475	+		HSERO_RS22090	0.75	-1.2
5,049,512	+		HSERO_RS22090	0.78	-0.2
5,049,679	+				-0.5
5,049,811	-				-0.4
5,049,827	-				-0.2
5,050,116	-		HSERO_RS22095	0.48	+0.2
5,050,160	+				-0.7
5,050,222	+		HSERO_RS22095	0.68	+0.7
5,050,369	-				+0.3
5,050,408	-				-0.0
5,050,438	-				+0.5
5,050,528	-				+0.3
5,051,029	+				+0.4
5,051,037	-				+1.9
5,051,042	-				-0.2
5,051,183	-		HSERO_RS22100	0.15	+0.2
5,051,285	+		HSERO_RS22100	0.25	+1.3
5,051,293	-		HSERO_RS22100	0.26	+0.4
5,051,349	-		HSERO_RS22100	0.32	+0.3