Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21745

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,979,617	-		HSERO_RS21740	0.82	-2.6
4,979,706	-		HSERO_RS21740	0.84	+1.9
4,979,752	+		HSERO_RS21740	0.86	-2.7
4,979,760	-		HSERO_RS21740	0.86	-2.0
4,979,777	-		HSERO_RS21740	0.86	-2.4
4,980,037	+				-0.1
4,980,175	+				-1.9
4,980,205	-				-1.0
4,980,265	-				-3.7
4,980,280	-				-1.1
4,980,381	-				+0.2
4,980,390	-				+2.5
4,980,686	-		HSERO_RS21745	0.33	+1.0
4,980,716	+		HSERO_RS21745	0.38	-0.1
4,980,928	+		HSERO_RS21745	0.74	+0.6
4,981,066	+				-0.0
4,981,091	+				+0.1
4,981,094	-				+0.3
4,981,104	-				+0.0
4,981,104	-				-0.3
4,981,104	-				-0.3