Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21590

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,940,416	+		HSERO_RS21580	0.86	-0.4
4,940,416	+		HSERO_RS21580	0.86	-0.4
4,940,424	-		HSERO_RS21580	0.87	+0.8
4,940,538	-				-0.5
4,940,826	-		HSERO_RS21585	0.40	-0.7
4,940,946	+		HSERO_RS21585	0.66	+0.3
4,940,954	-		HSERO_RS21585	0.67	+0.7
4,941,064	+				-0.4
4,941,165	-				+0.3
4,941,165	-				+0.1
4,941,189	-				-0.0
4,941,266	-				+0.5
4,941,271	-				+1.0
4,941,301	+				+1.9
4,941,315	-				+1.1
4,941,595	+		HSERO_RS21590	0.17	+0.8
4,941,691	+		HSERO_RS21590	0.22	+0.2
4,941,691	+		HSERO_RS21590	0.22	+1.4
4,941,699	-		HSERO_RS21590	0.22	+0.8
4,941,713	+		HSERO_RS21590	0.23	+0.9
4,941,739	-		HSERO_RS21590	0.24	+0.1
4,941,910	-		HSERO_RS21590	0.32	+0.9
4,942,423	+		HSERO_RS21590	0.57	+0.7
4,942,500	-		HSERO_RS21590	0.61	+1.0
4,942,507	+		HSERO_RS21590	0.61	+0.3
4,942,507	+		HSERO_RS21590	0.61	-0.0
4,942,515	+		HSERO_RS21590	0.62	+0.8
4,942,573	-		HSERO_RS21590	0.64	+0.5
4,942,810	+		HSERO_RS21590	0.76	+1.5
4,943,060	+		HSERO_RS21590	0.88	+0.9
4,943,099	-		HSERO_RS21590	0.90	+0.2
4,943,123	+				+0.5
4,943,346	+				-1.1
4,943,404	-				-1.2
4,943,413	-				+0.0
4,943,480	+				-0.0
4,943,500	+				+0.1
4,943,553	+				-0.6
4,943,553	+				-0.2
4,943,593	-				+0.5
4,943,627	-				-0.1
4,943,754	-				+0.0
4,943,881	+				-0.5
4,944,103	-		HSERO_RS21595	0.17	-0.4
4,944,127	-		HSERO_RS21595	0.18	+0.2
4,944,195	+		HSERO_RS21595	0.20	-0.0
4,944,208	+		HSERO_RS21595	0.21	+0.2