Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21090

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,824,144	+		HSERO_RS21085	0.20	+0.5
4,824,152	-		HSERO_RS21085	0.20	+0.8
4,824,152	-		HSERO_RS21085	0.20	+1.1
4,824,152	-		HSERO_RS21085	0.20	-0.5
4,824,280	+		HSERO_RS21085	0.31	+1.2
4,824,305	-		HSERO_RS21085	0.33	+0.6
4,824,317	-				+0.9
4,824,371	+		HSERO_RS21085	0.38	+0.4
4,824,617	-		HSERO_RS21085	0.58	+0.5
4,824,759	+		HSERO_RS21085	0.70	+1.3
4,824,908	+		HSERO_RS21085	0.82	+0.7
4,825,001	+		HSERO_RS21085	0.90	+0.7
4,825,009	-				+0.5
4,825,009	-				+0.4
4,825,309	-		HSERO_RS21090	0.22	+1.4
4,825,374	+		HSERO_RS21090	0.29	+1.5
4,825,517	-		HSERO_RS21090	0.46	+1.2
4,825,662	-		HSERO_RS21090	0.63	+0.9
4,825,995	-				-1.6
4,826,256	-		HSERO_RS21095	0.28	+0.7
4,826,256	-		HSERO_RS21095	0.28	+0.4
4,826,336	-		HSERO_RS21095	0.36	+0.6
4,826,344	-		HSERO_RS21095	0.37	+0.4
4,826,344	-		HSERO_RS21095	0.37	+1.1
4,826,425	-		HSERO_RS21095	0.45	+1.5
4,826,516	+		HSERO_RS21095	0.54	+0.6
4,826,521	+		HSERO_RS21095	0.54	+0.7
4,826,524	-		HSERO_RS21095	0.54	+0.1
4,826,613	-		HSERO_RS21095	0.63	+0.8
4,826,714	+		HSERO_RS21095	0.73	+0.7
4,826,714	+		HSERO_RS21095	0.73	-0.4
4,826,747	+		HSERO_RS21095	0.76	+1.4
4,826,792	+		HSERO_RS21095	0.81	+0.9
4,826,920	+				-0.2
4,826,923	-				+0.4
4,826,950	+				+0.3