Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21075 and HSERO_RS21080 are separated by 22 nucleotides HSERO_RS21080 and HSERO_RS21085 are separated by 7 nucleotides
HSERO_RS21075: HSERO_RS21075 - asparagine synthase, at 4,820,788 to 4,822,671
_RS21075
HSERO_RS21080: HSERO_RS21080 - glycosyl transferase, at 4,822,694 to 4,823,896
_RS21080
HSERO_RS21085: HSERO_RS21085 - glycosyl transferase family 1, at 4,823,904 to 4,825,127
_RS21085
Position (kb) 4822
4823
4824 Strain fitness (log2 ratio) -1
0
1
2 at 4821.711 kb on - strand, within HSERO_RS21075 at 4821.916 kb on - strand, within HSERO_RS21075 at 4821.991 kb on + strand, within HSERO_RS21075 at 4822.162 kb on + strand, within HSERO_RS21075 at 4822.225 kb on - strand, within HSERO_RS21075 at 4822.331 kb on + strand, within HSERO_RS21075 at 4822.514 kb on - strand at 4822.616 kb on - strand at 4822.626 kb on - strand at 4822.660 kb on + strand at 4822.668 kb on - strand at 4822.767 kb on - strand at 4822.866 kb on + strand, within HSERO_RS21080 at 4822.866 kb on + strand, within HSERO_RS21080 at 4822.876 kb on + strand, within HSERO_RS21080 at 4822.889 kb on - strand, within HSERO_RS21080 at 4822.993 kb on - strand, within HSERO_RS21080 at 4823.062 kb on + strand, within HSERO_RS21080 at 4823.270 kb on - strand, within HSERO_RS21080 at 4823.341 kb on + strand, within HSERO_RS21080 at 4823.544 kb on - strand, within HSERO_RS21080 at 4823.588 kb on - strand, within HSERO_RS21080 at 4823.671 kb on + strand, within HSERO_RS21080 at 4823.679 kb on - strand, within HSERO_RS21080 at 4823.795 kb on + strand at 4823.913 kb on - strand at 4824.030 kb on + strand, within HSERO_RS21085 at 4824.047 kb on + strand, within HSERO_RS21085 at 4824.053 kb on + strand, within HSERO_RS21085 at 4824.053 kb on - strand, within HSERO_RS21085 at 4824.072 kb on - strand, within HSERO_RS21085 at 4824.110 kb on + strand, within HSERO_RS21085 at 4824.144 kb on + strand, within HSERO_RS21085 at 4824.152 kb on - strand, within HSERO_RS21085 at 4824.152 kb on - strand, within HSERO_RS21085 at 4824.152 kb on - strand, within HSERO_RS21085 at 4824.280 kb on + strand, within HSERO_RS21085 at 4824.305 kb on - strand, within HSERO_RS21085 at 4824.317 kb on - strand at 4824.371 kb on + strand, within HSERO_RS21085 at 4824.617 kb on - strand, within HSERO_RS21085 at 4824.759 kb on + strand, within HSERO_RS21085
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,821,711 - HSERO_RS21075 0.49 +1.8 4,821,916 - HSERO_RS21075 0.60 +1.0 4,821,991 + HSERO_RS21075 0.64 -1.4 4,822,162 + HSERO_RS21075 0.73 +1.2 4,822,225 - HSERO_RS21075 0.76 +0.4 4,822,331 + HSERO_RS21075 0.82 +0.5 4,822,514 - +0.5 4,822,616 - +0.8 4,822,626 - +1.3 4,822,660 + -0.4 4,822,668 - +0.1 4,822,767 - +1.4 4,822,866 + HSERO_RS21080 0.14 +0.6 4,822,866 + HSERO_RS21080 0.14 +0.4 4,822,876 + HSERO_RS21080 0.15 +1.2 4,822,889 - HSERO_RS21080 0.16 -0.3 4,822,993 - HSERO_RS21080 0.25 +1.5 4,823,062 + HSERO_RS21080 0.31 +0.5 4,823,270 - HSERO_RS21080 0.48 +1.5 4,823,341 + HSERO_RS21080 0.54 +0.6 4,823,544 - HSERO_RS21080 0.71 -0.2 4,823,588 - HSERO_RS21080 0.74 +0.5 4,823,671 + HSERO_RS21080 0.81 +0.8 4,823,679 - HSERO_RS21080 0.82 -0.6 4,823,795 + +0.3 4,823,913 - +0.6 4,824,030 + HSERO_RS21085 0.10 +0.4 4,824,047 + HSERO_RS21085 0.12 +0.6 4,824,053 + HSERO_RS21085 0.12 +0.7 4,824,053 - HSERO_RS21085 0.12 +0.3 4,824,072 - HSERO_RS21085 0.14 +0.2 4,824,110 + HSERO_RS21085 0.17 +0.4 4,824,144 + HSERO_RS21085 0.20 +0.5 4,824,152 - HSERO_RS21085 0.20 +0.8 4,824,152 - HSERO_RS21085 0.20 +1.1 4,824,152 - HSERO_RS21085 0.20 -0.5 4,824,280 + HSERO_RS21085 0.31 +1.2 4,824,305 - HSERO_RS21085 0.33 +0.6 4,824,317 - +0.9 4,824,371 + HSERO_RS21085 0.38 +0.4 4,824,617 - HSERO_RS21085 0.58 +0.5 4,824,759 + HSERO_RS21085 0.70 +1.3
Or see this region's nucleotide sequence