Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20985

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,800,606	-		HSERO_RS20980	0.11	+0.4
4,800,634	+		HSERO_RS20980	0.14	-0.0
4,800,855	+		HSERO_RS20980	0.35	+0.2
4,800,920	-		HSERO_RS20980	0.41	+0.2
4,801,125	-		HSERO_RS20980	0.60	-0.3
4,801,330	-		HSERO_RS20980	0.80	-1.0
4,801,381	-		HSERO_RS20980	0.85	-0.4
4,801,994	-		HSERO_RS20985	0.79	+1.0
4,802,150	+				-0.2
4,802,199	-				+0.3
4,802,294	+		HSERO_RS20990	0.16	-0.7
4,802,302	-		HSERO_RS20990	0.17	-0.1
4,802,362	+		HSERO_RS20990	0.22	-1.2
4,802,544	-		HSERO_RS20990	0.39	-0.9
4,802,772	+		HSERO_RS20990	0.60	-0.3
4,802,889	-		HSERO_RS20990	0.70	+0.2
4,802,965	+		HSERO_RS20990	0.77	-0.3
4,802,999	-		HSERO_RS20990	0.81	+0.4
4,803,001	-		HSERO_RS20990	0.81	-0.7
4,803,042	+		HSERO_RS20990	0.84	+0.1
4,803,050	-		HSERO_RS20990	0.85	+1.0
4,803,055	-		HSERO_RS20990	0.86	-1.2