Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20665

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,737,288	+		HSERO_RS20660	0.22	-3.7
4,737,296	-		HSERO_RS20660	0.23	-4.4
4,737,381	-		HSERO_RS20660	0.30	-3.1
4,737,405	-		HSERO_RS20660	0.32	-3.1
4,737,457	+		HSERO_RS20660	0.36	-1.9
4,737,516	+		HSERO_RS20660	0.41	-3.7
4,737,572	-		HSERO_RS20660	0.46	-5.6
4,737,598	+		HSERO_RS20660	0.48	-3.2
4,737,727	+		HSERO_RS20660	0.59	-3.7
4,737,793	+		HSERO_RS20660	0.64	-5.3
4,738,025	-		HSERO_RS20660	0.83	-3.0
4,738,054	-		HSERO_RS20660	0.86	-2.7
4,738,081	+		HSERO_RS20660	0.88	-4.5
4,738,119	-				-3.9
4,738,182	+				-3.3
4,738,225	+				-3.6
4,738,225	+				-3.1
4,738,291	+				-3.6
4,738,291	+				-3.4
4,738,301	+				-4.7
4,738,438	-		HSERO_RS20665	0.27	-4.9
4,738,502	-		HSERO_RS20665	0.35	-2.6
4,738,547	+		HSERO_RS20665	0.41	-3.9
4,738,647	-		HSERO_RS20665	0.53	-5.3
4,738,650	+		HSERO_RS20665	0.54	-1.9
4,738,736	+		HSERO_RS20665	0.65	-4.0
4,738,800	-				-1.4
4,739,271	-				-1.1
4,739,328	+				+2.9
4,739,371	+		HSERO_RS20670	0.12	+0.2
4,739,386	-		HSERO_RS20670	0.14	+0.3
4,739,406	+		HSERO_RS20670	0.16	+0.3
4,739,431	+		HSERO_RS20670	0.19	-0.1
4,739,533	+		HSERO_RS20670	0.30	-1.8
4,739,552	-		HSERO_RS20670	0.32	-0.2
4,739,573	+		HSERO_RS20670	0.35	+0.3
4,739,596	-		HSERO_RS20670	0.37	-0.2
4,739,770	+		HSERO_RS20670	0.57	-0.3
4,739,794	+		HSERO_RS20670	0.59	+0.9
4,739,802	-		HSERO_RS20670	0.60	+0.0
4,739,802	-		HSERO_RS20670	0.60	+0.2
4,739,954	-		HSERO_RS20670	0.77	-0.1
4,739,961	+		HSERO_RS20670	0.78	-0.1
4,739,982	+		HSERO_RS20670	0.80	-0.5
4,739,982	+		HSERO_RS20670	0.80	-0.8