Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20635

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
4,730,261	+		HSERO_RS20630	0.25	-1.7
4,730,425	+		HSERO_RS20630	0.41	-2.4
4,730,871	+		HSERO_RS20630	0.82	-2.4
4,731,165	+				-3.4
4,731,270	+		HSERO_RS20635	0.11	-4.3
4,731,273	-		HSERO_RS20635	0.11	-3.4
4,731,298	+		HSERO_RS20635	0.13	-3.5
4,731,306	-		HSERO_RS20635	0.13	-4.4
4,731,623	+		HSERO_RS20635	0.32	-0.1
4,731,758	+		HSERO_RS20635	0.40	-2.8
4,731,780	-		HSERO_RS20635	0.41	-3.8
4,731,806	+		HSERO_RS20635	0.43	-2.2
4,732,071	+		HSERO_RS20635	0.59	-2.8
4,732,071	+		HSERO_RS20635	0.59	-3.6
4,732,071	+		HSERO_RS20635	0.59	-4.9
4,732,086	-		HSERO_RS20635	0.59	-5.6
4,732,112	+		HSERO_RS20635	0.61	-3.0
4,732,120	-				-0.7
4,732,141	+		HSERO_RS20635	0.63	-2.3
4,732,172	-		HSERO_RS20635	0.65	-2.9
4,732,214	-		HSERO_RS20635	0.67	-3.9
4,732,333	-		HSERO_RS20635	0.74	-5.3
4,732,346	-				+0.9
4,732,558	+		HSERO_RS20635	0.87	-1.0
4,732,762	-				-3.7
4,732,847	+				-4.3
4,732,893	+		HSERO_RS20640	0.12	-3.6
4,732,901	-		HSERO_RS20640	0.13	-1.9
4,732,985	+		HSERO_RS20640	0.24	-1.9
4,733,281	+		HSERO_RS20640	0.61	-3.5
4,733,296	-		HSERO_RS20640	0.63	-2.6
4,733,415	-		HSERO_RS20640	0.78	-3.9
4,733,444	+		HSERO_RS20640	0.82	-3.8
4,733,545	-				-2.3
4,733,572	+				-1.4
4,733,587	-				-3.2
4,733,706	-				-4.5
4,733,706	-				-5.6
4,733,708	+				-2.8