Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18620 and HSERO_RS18625 are separated by 14 nucleotides HSERO_RS18625 and HSERO_RS18630 are separated by 299 nucleotides HSERO_RS18630 and HSERO_RS18635 are separated by 47 nucleotides
HSERO_RS18620: HSERO_RS18620 - methyl-accepting chemotaxis protein, at 4,271,794 to 4,273,509
_RS18620
HSERO_RS18625: HSERO_RS18625 - chemotaxis protein CheV, at 4,273,524 to 4,274,486
_RS18625
HSERO_RS18630: HSERO_RS18630 - hemerythrin, at 4,274,786 to 4,275,190
_RS18630
HSERO_RS18635: HSERO_RS18635 - signal transduction protein, at 4,275,238 to 4,276,872
_RS18635
Position (kb) 4273
4274
4275 Strain fitness (log2 ratio) -1
0
1 at 4272.581 kb on - strand, within HSERO_RS18620 at 4272.720 kb on + strand, within HSERO_RS18620 at 4272.816 kb on + strand, within HSERO_RS18620 at 4272.968 kb on + strand, within HSERO_RS18620 at 4272.981 kb on + strand, within HSERO_RS18620 at 4273.008 kb on + strand, within HSERO_RS18620 at 4273.057 kb on - strand, within HSERO_RS18620 at 4273.125 kb on - strand, within HSERO_RS18620 at 4273.190 kb on - strand, within HSERO_RS18620 at 4273.247 kb on - strand, within HSERO_RS18620 at 4273.349 kb on + strand at 4273.425 kb on - strand at 4273.493 kb on + strand at 4273.842 kb on + strand, within HSERO_RS18625 at 4274.028 kb on + strand, within HSERO_RS18625 at 4274.034 kb on + strand, within HSERO_RS18625 at 4274.302 kb on + strand, within HSERO_RS18625 at 4274.310 kb on - strand, within HSERO_RS18625 at 4274.329 kb on - strand, within HSERO_RS18625 at 4274.526 kb on + strand at 4274.642 kb on + strand at 4274.660 kb on - strand at 4274.660 kb on - strand at 4274.699 kb on + strand at 4274.754 kb on + strand at 4274.770 kb on - strand at 4275.062 kb on - strand, within HSERO_RS18630 at 4275.373 kb on + strand at 4275.431 kb on - strand, within HSERO_RS18635 at 4275.431 kb on - strand, within HSERO_RS18635
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,272,581 - HSERO_RS18620 0.46 -0.4 4,272,720 + HSERO_RS18620 0.54 -0.1 4,272,816 + HSERO_RS18620 0.60 -0.2 4,272,968 + HSERO_RS18620 0.68 +0.9 4,272,981 + HSERO_RS18620 0.69 +0.3 4,273,008 + HSERO_RS18620 0.71 +0.7 4,273,057 - HSERO_RS18620 0.74 -0.3 4,273,125 - HSERO_RS18620 0.78 +0.6 4,273,190 - HSERO_RS18620 0.81 +1.5 4,273,247 - HSERO_RS18620 0.85 +0.4 4,273,349 + +0.2 4,273,425 - +0.0 4,273,493 + +0.6 4,273,842 + HSERO_RS18625 0.33 +1.4 4,274,028 + HSERO_RS18625 0.52 +0.9 4,274,034 + HSERO_RS18625 0.53 +0.3 4,274,302 + HSERO_RS18625 0.81 +0.3 4,274,310 - HSERO_RS18625 0.82 +0.3 4,274,329 - HSERO_RS18625 0.84 +0.3 4,274,526 + +0.2 4,274,642 + +0.6 4,274,660 - +0.2 4,274,660 - +0.3 4,274,699 + +0.5 4,274,754 + +0.9 4,274,770 - +0.1 4,275,062 - HSERO_RS18630 0.68 +0.6 4,275,373 + -0.6 4,275,431 - HSERO_RS18635 0.12 +0.6 4,275,431 - HSERO_RS18635 0.12 -0.6
Or see this region's nucleotide sequence