Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18545 and HSERO_RS18550 are separated by 55 nucleotides HSERO_RS18550 and HSERO_RS18555 are separated by 7 nucleotides HSERO_RS18555 and HSERO_RS18560 are separated by 130 nucleotides
HSERO_RS18545: HSERO_RS18545 - 3-oxoacyl-ACP synthase, at 4,254,419 to 4,255,663
_RS18545
HSERO_RS18550: HSERO_RS18550 - excinuclease ATPase subunit, at 4,255,719 to 4,256,162
_RS18550
HSERO_RS18555: HSERO_RS18555 - phosphopantetheinyl transferase, at 4,256,170 to 4,256,880
_RS18555
HSERO_RS18560: HSERO_RS18560 - hypothetical protein, at 4,257,011 to 4,257,769
_RS18560
Position (kb) 4255
4256
4257 Strain fitness (log2 ratio) -1
0
1 at 4254.729 kb on - strand, within HSERO_RS18545 at 4254.852 kb on - strand, within HSERO_RS18545 at 4255.008 kb on + strand, within HSERO_RS18545 at 4255.079 kb on + strand, within HSERO_RS18545 at 4255.084 kb on + strand, within HSERO_RS18545 at 4255.087 kb on - strand, within HSERO_RS18545 at 4255.092 kb on - strand, within HSERO_RS18545 at 4255.185 kb on - strand, within HSERO_RS18545 at 4255.352 kb on + strand, within HSERO_RS18545 at 4255.402 kb on + strand, within HSERO_RS18545 at 4255.528 kb on - strand, within HSERO_RS18545 at 4255.673 kb on + strand at 4255.681 kb on - strand at 4255.832 kb on + strand, within HSERO_RS18550 at 4256.174 kb on + strand at 4256.179 kb on + strand at 4256.184 kb on + strand at 4256.212 kb on + strand at 4256.247 kb on + strand, within HSERO_RS18555 at 4256.361 kb on + strand, within HSERO_RS18555 at 4256.369 kb on - strand, within HSERO_RS18555 at 4256.384 kb on + strand, within HSERO_RS18555 at 4256.437 kb on + strand, within HSERO_RS18555 at 4256.483 kb on + strand at 4257.105 kb on - strand, within HSERO_RS18560
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,254,729 - HSERO_RS18545 0.25 +0.9 4,254,852 - HSERO_RS18545 0.35 +0.3 4,255,008 + HSERO_RS18545 0.47 +0.1 4,255,079 + HSERO_RS18545 0.53 +0.1 4,255,084 + HSERO_RS18545 0.53 -1.0 4,255,087 - HSERO_RS18545 0.54 -0.2 4,255,092 - HSERO_RS18545 0.54 +0.6 4,255,185 - HSERO_RS18545 0.62 -0.0 4,255,352 + HSERO_RS18545 0.75 +0.1 4,255,402 + HSERO_RS18545 0.79 -0.2 4,255,528 - HSERO_RS18545 0.89 -0.1 4,255,673 + +0.3 4,255,681 - +1.5 4,255,832 + HSERO_RS18550 0.25 +0.5 4,256,174 + +0.2 4,256,179 + +0.5 4,256,184 + -0.7 4,256,212 + -0.5 4,256,247 + HSERO_RS18555 0.11 +0.9 4,256,361 + HSERO_RS18555 0.27 +0.2 4,256,369 - HSERO_RS18555 0.28 +0.3 4,256,384 + HSERO_RS18555 0.30 -1.0 4,256,437 + HSERO_RS18555 0.38 +1.4 4,256,483 + +0.9 4,257,105 - HSERO_RS18560 0.12 +1.0
Or see this region's nucleotide sequence