Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18520 and HSERO_RS18525 overlap by 4 nucleotides HSERO_RS18525 and HSERO_RS18530 are separated by 13 nucleotides
HSERO_RS18520: HSERO_RS18520 - exporter, at 4,249,007 to 4,251,439
_RS18520
HSERO_RS18525: HSERO_RS18525 - hypothetical protein, at 4,251,436 to 4,252,005
_RS18525
HSERO_RS18530: HSERO_RS18530 - 3-oxoacyl-ACP synthase, at 4,252,019 to 4,253,218
_RS18530
Position (kb) 4251
4252
4253 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4250.466 kb on + strand, within HSERO_RS18520 at 4250.474 kb on - strand, within HSERO_RS18520 at 4250.484 kb on - strand, within HSERO_RS18520 at 4250.496 kb on + strand, within HSERO_RS18520 at 4250.598 kb on - strand, within HSERO_RS18520 at 4250.604 kb on + strand, within HSERO_RS18520 at 4250.636 kb on - strand at 4250.682 kb on + strand, within HSERO_RS18520 at 4250.760 kb on - strand, within HSERO_RS18520 at 4250.805 kb on - strand, within HSERO_RS18520 at 4250.966 kb on + strand, within HSERO_RS18520 at 4251.174 kb on + strand, within HSERO_RS18520 at 4251.311 kb on - strand at 4251.563 kb on + strand, within HSERO_RS18525 at 4251.755 kb on + strand, within HSERO_RS18525 at 4251.763 kb on - strand, within HSERO_RS18525 at 4251.864 kb on - strand, within HSERO_RS18525 at 4251.972 kb on + strand at 4251.988 kb on + strand at 4251.991 kb on - strand at 4252.031 kb on - strand at 4252.165 kb on - strand, within HSERO_RS18530 at 4252.268 kb on - strand, within HSERO_RS18530 at 4252.469 kb on + strand, within HSERO_RS18530 at 4252.477 kb on - strand, within HSERO_RS18530 at 4252.477 kb on - strand, within HSERO_RS18530 at 4252.542 kb on + strand, within HSERO_RS18530 at 4252.550 kb on - strand, within HSERO_RS18530 at 4252.622 kb on + strand, within HSERO_RS18530 at 4252.707 kb on - strand, within HSERO_RS18530 at 4252.962 kb on - strand, within HSERO_RS18530 at 4252.971 kb on + strand, within HSERO_RS18530
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,250,466 + HSERO_RS18520 0.60 +1.9 4,250,474 - HSERO_RS18520 0.60 -0.6 4,250,484 - HSERO_RS18520 0.61 -0.0 4,250,496 + HSERO_RS18520 0.61 +1.5 4,250,598 - HSERO_RS18520 0.65 +0.2 4,250,604 + HSERO_RS18520 0.66 +0.1 4,250,636 - +2.4 4,250,682 + HSERO_RS18520 0.69 -2.0 4,250,760 - HSERO_RS18520 0.72 -0.9 4,250,805 - HSERO_RS18520 0.74 -0.1 4,250,966 + HSERO_RS18520 0.81 +1.9 4,251,174 + HSERO_RS18520 0.89 -0.5 4,251,311 - -0.2 4,251,563 + HSERO_RS18525 0.22 +0.5 4,251,755 + HSERO_RS18525 0.56 +0.1 4,251,763 - HSERO_RS18525 0.57 +0.8 4,251,864 - HSERO_RS18525 0.75 +0.9 4,251,972 + +0.0 4,251,988 + -0.4 4,251,991 - +0.1 4,252,031 - +0.2 4,252,165 - HSERO_RS18530 0.12 +0.4 4,252,268 - HSERO_RS18530 0.21 +0.2 4,252,469 + HSERO_RS18530 0.38 +0.4 4,252,477 - HSERO_RS18530 0.38 +0.4 4,252,477 - HSERO_RS18530 0.38 -0.2 4,252,542 + HSERO_RS18530 0.44 +0.6 4,252,550 - HSERO_RS18530 0.44 +0.3 4,252,622 + HSERO_RS18530 0.50 +0.0 4,252,707 - HSERO_RS18530 0.57 +0.5 4,252,962 - HSERO_RS18530 0.79 +0.3 4,252,971 + HSERO_RS18530 0.79 -0.1
Or see this region's nucleotide sequence