Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18495 and HSERO_RS18500 overlap by 4 nucleotides HSERO_RS18500 and HSERO_RS18505 overlap by 14 nucleotides HSERO_RS18505 and HSERO_RS18510 overlap by 8 nucleotides HSERO_RS18510 and HSERO_RS18515 overlap by 4 nucleotides
HSERO_RS18495: HSERO_RS18495 - glycosyl transferase, at 4,244,635 to 4,245,423
_RS18495
HSERO_RS18500: HSERO_RS18500 - acyltransferase, at 4,245,420 to 4,246,382
_RS18500
HSERO_RS18505: HSERO_RS18505 - histidine ammonia-lyase, at 4,246,369 to 4,247,949
_RS18505
HSERO_RS18510: HSERO_RS18510 - thioesterase, at 4,247,942 to 4,248,406
_RS18510
HSERO_RS18515: HSERO_RS18515 - membrane protein, at 4,248,403 to 4,249,014
_RS18515
Position (kb) 4246
4247
4248 Strain fitness (log2 ratio) -1
0
1 at 4245.463 kb on - strand at 4245.486 kb on + strand at 4245.713 kb on + strand, within HSERO_RS18500 at 4245.736 kb on - strand, within HSERO_RS18500 at 4245.844 kb on - strand, within HSERO_RS18500 at 4246.172 kb on + strand, within HSERO_RS18500 at 4246.198 kb on + strand, within HSERO_RS18500 at 4246.258 kb on - strand, within HSERO_RS18500 at 4246.258 kb on - strand, within HSERO_RS18500 at 4246.409 kb on - strand at 4246.644 kb on + strand, within HSERO_RS18505 at 4246.883 kb on - strand, within HSERO_RS18505 at 4246.887 kb on + strand, within HSERO_RS18505 at 4247.019 kb on + strand, within HSERO_RS18505 at 4247.485 kb on + strand, within HSERO_RS18505 at 4247.560 kb on - strand, within HSERO_RS18505 at 4247.590 kb on + strand, within HSERO_RS18505 at 4247.597 kb on + strand, within HSERO_RS18505 at 4247.663 kb on - strand, within HSERO_RS18505 at 4247.675 kb on + strand, within HSERO_RS18505 at 4247.721 kb on + strand, within HSERO_RS18505 at 4247.756 kb on + strand, within HSERO_RS18505 at 4247.855 kb on - strand at 4247.928 kb on + strand at 4247.983 kb on - strand at 4248.024 kb on - strand, within HSERO_RS18510 at 4248.129 kb on + strand, within HSERO_RS18510 at 4248.165 kb on + strand, within HSERO_RS18510 at 4248.508 kb on + strand, within HSERO_RS18515 at 4248.738 kb on - strand, within HSERO_RS18515
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,245,463 - +0.9 4,245,486 + +0.6 4,245,713 + HSERO_RS18500 0.30 -0.5 4,245,736 - HSERO_RS18500 0.33 +0.4 4,245,844 - HSERO_RS18500 0.44 -0.3 4,246,172 + HSERO_RS18500 0.78 -0.3 4,246,198 + HSERO_RS18500 0.81 -0.1 4,246,258 - HSERO_RS18500 0.87 -1.0 4,246,258 - HSERO_RS18500 0.87 +0.5 4,246,409 - +0.1 4,246,644 + HSERO_RS18505 0.17 +0.1 4,246,883 - HSERO_RS18505 0.33 +0.7 4,246,887 + HSERO_RS18505 0.33 -0.4 4,247,019 + HSERO_RS18505 0.41 -0.5 4,247,485 + HSERO_RS18505 0.71 +0.7 4,247,560 - HSERO_RS18505 0.75 -0.0 4,247,590 + HSERO_RS18505 0.77 +0.5 4,247,597 + HSERO_RS18505 0.78 -0.4 4,247,663 - HSERO_RS18505 0.82 -0.1 4,247,675 + HSERO_RS18505 0.83 -0.9 4,247,721 + HSERO_RS18505 0.86 +0.9 4,247,756 + HSERO_RS18505 0.88 +0.6 4,247,855 - +1.0 4,247,928 + -1.2 4,247,983 - +0.4 4,248,024 - HSERO_RS18510 0.18 -0.1 4,248,129 + HSERO_RS18510 0.40 +0.1 4,248,165 + HSERO_RS18510 0.48 -0.1 4,248,508 + HSERO_RS18515 0.17 -0.0 4,248,738 - HSERO_RS18515 0.55 +0.1
Or see this region's nucleotide sequence