Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18350 and HSERO_RS18355 are separated by 310 nucleotides HSERO_RS18355 and HSERO_RS18360 overlap by 4 nucleotides HSERO_RS18360 and HSERO_RS18365 are separated by 95 nucleotides HSERO_RS18365 and HSERO_RS18370 are separated by 60 nucleotides
HSERO_RS18350: HSERO_RS18350 - CoA transferase, at 4,211,107 to 4,212,354
_RS18350
HSERO_RS18355: HSERO_RS18355 - recombinase RecR, at 4,212,665 to 4,213,261
_RS18355
HSERO_RS18360: HSERO_RS18360 - hypothetical protein, at 4,213,258 to 4,213,560
_RS18360
HSERO_RS18365: HSERO_RS18365 - hypothetical protein, at 4,213,656 to 4,213,982
_RS18365
HSERO_RS18370: HSERO_RS18370 - DNA polymerase III subunit gamma/tau, at 4,214,043 to 4,216,181
_RS18370
Position (kb) 4213
4214 Strain fitness (log2 ratio) -1
0
1
2 at 4212.680 kb on + strand at 4212.915 kb on - strand, within HSERO_RS18355 at 4212.970 kb on + strand, within HSERO_RS18355 at 4212.989 kb on - strand, within HSERO_RS18355 at 4213.077 kb on + strand, within HSERO_RS18355 at 4213.085 kb on - strand, within HSERO_RS18355 at 4213.085 kb on - strand, within HSERO_RS18355 at 4213.176 kb on + strand, within HSERO_RS18355 at 4213.184 kb on - strand, within HSERO_RS18355 at 4213.429 kb on + strand, within HSERO_RS18360 at 4213.735 kb on + strand, within HSERO_RS18365 at 4213.775 kb on - strand, within HSERO_RS18365 at 4214.060 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,212,680 + -0.6 4,212,915 - HSERO_RS18355 0.42 -0.3 4,212,970 + HSERO_RS18355 0.51 -0.4 4,212,989 - HSERO_RS18355 0.54 -0.2 4,213,077 + HSERO_RS18355 0.69 +0.1 4,213,085 - HSERO_RS18355 0.70 -0.5 4,213,085 - HSERO_RS18355 0.70 +1.9 4,213,176 + HSERO_RS18355 0.86 -0.4 4,213,184 - HSERO_RS18355 0.87 +0.3 4,213,429 + HSERO_RS18360 0.56 +1.0 4,213,735 + HSERO_RS18365 0.24 -0.7 4,213,775 - HSERO_RS18365 0.36 +0.3 4,214,060 + +0.8
Or see this region's nucleotide sequence