Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18170 and HSERO_RS18175 are separated by 23 nucleotides HSERO_RS18175 and HSERO_RS18180 are separated by 35 nucleotides HSERO_RS18180 and HSERO_RS18185 are separated by 33 nucleotides
HSERO_RS18170: HSERO_RS18170 - nitrate reductase A subunit beta, at 4,175,768 to 4,177,321
_RS18170
HSERO_RS18175: HSERO_RS18175 - nitrate reductase, at 4,177,345 to 4,177,998
_RS18175
HSERO_RS18180: HSERO_RS18180 - nitrate reductase, at 4,178,034 to 4,178,726
_RS18180
HSERO_RS18185: HSERO_RS18185 - molybdenum cofactor biosynthesis protein MoaA, at 4,178,760 to 4,179,734
_RS18185
Position (kb) 4178
4179 Strain fitness (log2 ratio) -1
0
1 at 4177.113 kb on - strand, within HSERO_RS18170 at 4177.256 kb on + strand at 4177.404 kb on + strand at 4177.627 kb on + strand, within HSERO_RS18175 at 4177.643 kb on + strand, within HSERO_RS18175 at 4177.666 kb on - strand, within HSERO_RS18175 at 4177.713 kb on + strand, within HSERO_RS18175 at 4177.735 kb on - strand, within HSERO_RS18175 at 4178.039 kb on - strand at 4178.039 kb on - strand at 4178.108 kb on + strand, within HSERO_RS18180 at 4178.194 kb on + strand, within HSERO_RS18180 at 4178.252 kb on + strand, within HSERO_RS18180 at 4178.495 kb on - strand, within HSERO_RS18180 at 4178.530 kb on + strand, within HSERO_RS18180 at 4178.549 kb on + strand, within HSERO_RS18180 at 4178.679 kb on - strand at 4178.715 kb on + strand at 4178.771 kb on - strand at 4178.854 kb on - strand at 4179.073 kb on + strand, within HSERO_RS18185 at 4179.073 kb on + strand, within HSERO_RS18185 at 4179.122 kb on - strand, within HSERO_RS18185 at 4179.124 kb on + strand, within HSERO_RS18185 at 4179.129 kb on + strand, within HSERO_RS18185 at 4179.187 kb on + strand, within HSERO_RS18185 at 4179.195 kb on - strand, within HSERO_RS18185 at 4179.279 kb on + strand, within HSERO_RS18185 at 4179.560 kb on + strand, within HSERO_RS18185 at 4179.563 kb on - strand, within HSERO_RS18185 at 4179.573 kb on - strand, within HSERO_RS18185
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 4,177,113 - HSERO_RS18170 0.87 +0.2 4,177,256 + +0.5 4,177,404 + +0.3 4,177,627 + HSERO_RS18175 0.43 +0.2 4,177,643 + HSERO_RS18175 0.46 -0.0 4,177,666 - HSERO_RS18175 0.49 +0.7 4,177,713 + HSERO_RS18175 0.56 -0.1 4,177,735 - HSERO_RS18175 0.60 -0.8 4,178,039 - +0.3 4,178,039 - -0.6 4,178,108 + HSERO_RS18180 0.11 +0.9 4,178,194 + HSERO_RS18180 0.23 -0.8 4,178,252 + HSERO_RS18180 0.31 +0.3 4,178,495 - HSERO_RS18180 0.67 +1.6 4,178,530 + HSERO_RS18180 0.72 +0.6 4,178,549 + HSERO_RS18180 0.74 -0.1 4,178,679 - -0.8 4,178,715 + -0.2 4,178,771 - +0.3 4,178,854 - +0.1 4,179,073 + HSERO_RS18185 0.32 +0.0 4,179,073 + HSERO_RS18185 0.32 -0.1 4,179,122 - HSERO_RS18185 0.37 -0.6 4,179,124 + HSERO_RS18185 0.37 +0.0 4,179,129 + HSERO_RS18185 0.38 -0.2 4,179,187 + HSERO_RS18185 0.44 -0.0 4,179,195 - HSERO_RS18185 0.45 -0.9 4,179,279 + HSERO_RS18185 0.53 +1.0 4,179,560 + HSERO_RS18185 0.82 +0.3 4,179,563 - HSERO_RS18185 0.82 +0.3 4,179,573 - HSERO_RS18185 0.83 -0.1
Or see this region's nucleotide sequence