Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16435

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
3,760,814	-		HSERO_RS16430	0.37	-0.5
3,760,999	-		HSERO_RS16430	0.55	-0.0
3,761,167	-		HSERO_RS16430	0.71	+0.7
3,761,222	-		HSERO_RS16430	0.77	-0.4
3,761,227	+		HSERO_RS16430	0.77	+0.5
3,761,235	-		HSERO_RS16430	0.78	+0.5
3,761,242	+		HSERO_RS16430	0.79	+0.1
3,761,278	+		HSERO_RS16430	0.82	-0.0
3,761,512	+				-1.0
3,761,512	+				-0.1
3,761,520	-				+0.6
3,761,525	-				-0.4
3,761,643	-				+0.5
3,761,645	+				-0.2
3,761,645	+				+1.1
3,761,653	-				-0.3
3,761,700	+				+0.2
3,761,773	-		HSERO_RS16435	0.19	+0.6
3,761,773	-		HSERO_RS16435	0.19	-0.6
3,761,773	-		HSERO_RS16435	0.19	+0.5
3,761,864	+		HSERO_RS16435	0.35	+0.1
3,761,972	-		HSERO_RS16435	0.53	+0.2
3,761,977	+		HSERO_RS16435	0.53	+0.9
3,762,011	+		HSERO_RS16435	0.59	+1.7
3,762,124	+		HSERO_RS16435	0.78	+1.1
3,762,580	+		HSERO_RS16440	0.19	-3.8
3,762,603	-		HSERO_RS16440	0.20	-2.1
3,762,624	+		HSERO_RS16440	0.22	-4.1
3,762,657	+		HSERO_RS16440	0.25	-4.1
3,762,810	+		HSERO_RS16440	0.37	-6.0
3,762,833	+		HSERO_RS16440	0.39	+0.4
3,762,935	+		HSERO_RS16440	0.47	-2.9
3,763,232	-		HSERO_RS16440	0.71	-3.1