Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS15345 and HSERO_RS15350 are separated by 36 nucleotides HSERO_RS15350 and HSERO_RS15355 are separated by 64 nucleotides HSERO_RS15355 and HSERO_RS15360 are separated by 80 nucleotides
HSERO_RS15345: HSERO_RS15345 - cytochrome BD oxidase subunit II, at 3,514,765 to 3,515,904
_RS15345
HSERO_RS15350: HSERO_RS15350 - membrane protein, at 3,515,941 to 3,516,111
_RS15350
HSERO_RS15355: HSERO_RS15355 - hypothetical protein, at 3,516,176 to 3,516,712
_RS15355
HSERO_RS15360: HSERO_RS15360 - regulator of disulfide bond formation redox protein, at 3,516,793 to 3,517,227
_RS15360
Position (kb) 3515
3516
3517 Strain fitness (log2 ratio) -1
0
1
2 at 3514.979 kb on + strand, within HSERO_RS15345 at 3515.075 kb on + strand, within HSERO_RS15345 at 3515.158 kb on + strand, within HSERO_RS15345 at 3515.176 kb on + strand, within HSERO_RS15345 at 3515.323 kb on + strand, within HSERO_RS15345 at 3515.794 kb on + strand at 3515.843 kb on - strand at 3515.979 kb on - strand, within HSERO_RS15350 at 3516.036 kb on + strand, within HSERO_RS15350 at 3516.296 kb on + strand, within HSERO_RS15355 at 3516.311 kb on - strand, within HSERO_RS15355 at 3516.576 kb on - strand, within HSERO_RS15355 at 3516.802 kb on + strand at 3516.853 kb on - strand, within HSERO_RS15360 at 3516.882 kb on - strand at 3516.892 kb on + strand, within HSERO_RS15360
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 3,514,979 + HSERO_RS15345 0.19 +0.9 3,515,075 + HSERO_RS15345 0.27 -0.2 3,515,158 + HSERO_RS15345 0.34 -0.4 3,515,176 + HSERO_RS15345 0.36 +0.3 3,515,323 + HSERO_RS15345 0.49 -0.4 3,515,794 + +0.3 3,515,843 - +0.3 3,515,979 - HSERO_RS15350 0.22 +0.1 3,516,036 + HSERO_RS15350 0.56 +0.6 3,516,296 + HSERO_RS15355 0.22 +0.2 3,516,311 - HSERO_RS15355 0.25 -0.7 3,516,576 - HSERO_RS15355 0.74 -0.1 3,516,802 + -0.3 3,516,853 - HSERO_RS15360 0.14 +0.6 3,516,882 - +2.5 3,516,892 + HSERO_RS15360 0.23 -0.6
Or see this region's nucleotide sequence