Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14985

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
3,402,666	+				+0.4
3,402,693	+				+0.4
3,402,693	+				+0.7
3,402,767	+				+0.7
3,402,858	-				+0.3
3,403,051	-				-0.6
3,403,180	+				-0.4
3,403,192	-				+0.3
3,403,275	+				-0.1
3,403,303	+				-0.1
3,403,308	+				+0.1
3,403,391	+				+0.4
3,403,538	+				-0.8
3,403,627	-		HSERO_RS14985	0.26	+0.7
3,403,754	-		HSERO_RS14985	0.47	+0.6
3,403,809	-				+0.2
3,403,816	+		HSERO_RS14985	0.57	+0.9
3,403,839	+		HSERO_RS14985	0.61	+0.6
3,404,000	-		HSERO_RS14985	0.88	+1.5
3,404,111	+				+0.7
3,404,112	+				+0.5
3,404,220	+				+0.0
3,404,505	+		HSERO_RS14990	0.82	+0.8
3,404,640	+				+1.0
3,404,949	+				-0.3
3,404,957	-				-0.2