Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13715

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
3,116,157	-				-0.0
3,116,238	+				+0.1
3,116,514	-				+0.1
3,116,604	-				+0.1
3,116,760	-				+1.0
3,116,811	+				+0.1
3,116,819	-				-0.1
3,116,860	-				+0.2
3,116,967	-				+0.1
3,117,078	-		HSERO_RS13715	0.32	+0.6
3,117,224	-		HSERO_RS13715	0.64	+0.6
3,117,426	+				+0.3
3,117,496	-				+0.9
3,117,547	-				+0.2
3,117,933	+		HSERO_RS13720	0.52	+0.2
3,117,941	-		HSERO_RS13720	0.53	-1.3
3,117,951	-		HSERO_RS13720	0.54	+0.4
3,117,963	-		HSERO_RS13720	0.56	+0.0
3,118,052	+		HSERO_RS13720	0.67	+0.0
3,118,052	+		HSERO_RS13720	0.67	+0.9
3,118,186	+				+0.1
3,118,217	+		HSERO_RS13720	0.87	+1.5
3,118,272	+				+0.4