Experiment: Carbon source Phenylacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS13650 and HSERO_RS13655 are separated by 45 nucleotides HSERO_RS13655 and HSERO_RS13660 are separated by 127 nucleotides HSERO_RS13660 and HSERO_RS13665 are separated by 246 nucleotides
HSERO_RS13650: HSERO_RS13650 - high-affinity Fe2+/Pb2+ permease, at 3,099,772 to 3,100,644
_RS13650
HSERO_RS13655: HSERO_RS13655 - hypothetical protein, at 3,100,690 to 3,101,031
_RS13655
HSERO_RS13660: HSERO_RS13660 - membrane protein, at 3,101,159 to 3,101,704
_RS13660
HSERO_RS13665: HSERO_RS13665 - methyl-accepting chemotaxis protein, at 3,101,951 to 3,103,597
_RS13665
Position (kb) 3101
3102 Strain fitness (log2 ratio) -2
-1
0
1 at 3100.212 kb on + strand, within HSERO_RS13650 at 3100.317 kb on - strand, within HSERO_RS13650 at 3100.323 kb on + strand, within HSERO_RS13650 at 3100.453 kb on - strand, within HSERO_RS13650 at 3100.473 kb on - strand, within HSERO_RS13650 at 3100.956 kb on - strand, within HSERO_RS13655 at 3100.981 kb on + strand, within HSERO_RS13655 at 3101.533 kb on - strand, within HSERO_RS13660 at 3101.821 kb on + strand at 3102.302 kb on - strand, within HSERO_RS13665 at 3102.445 kb on - strand, within HSERO_RS13665 at 3102.604 kb on - strand, within HSERO_RS13665
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Phenylacetic 5 mM remove 3,100,212 + HSERO_RS13650 0.50 +1.2 3,100,317 - HSERO_RS13650 0.62 +0.9 3,100,323 + HSERO_RS13650 0.63 +1.1 3,100,453 - HSERO_RS13650 0.78 +0.8 3,100,473 - HSERO_RS13650 0.80 +1.5 3,100,956 - HSERO_RS13655 0.78 +0.9 3,100,981 + HSERO_RS13655 0.85 +1.2 3,101,533 - HSERO_RS13660 0.68 +0.9 3,101,821 + -0.4 3,102,302 - HSERO_RS13665 0.21 -0.9 3,102,445 - HSERO_RS13665 0.30 +0.3 3,102,604 - HSERO_RS13665 0.40 -2.0
Or see this region's nucleotide sequence