Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13655

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
3,099,826	+				+0.6
3,099,844	-				+0.0
3,099,844	-				-0.6
3,099,918	+		HSERO_RS13650	0.17	+0.9
3,100,158	+		HSERO_RS13650	0.44	+0.7
3,100,212	+		HSERO_RS13650	0.50	+1.2
3,100,317	-		HSERO_RS13650	0.62	+0.9
3,100,323	+		HSERO_RS13650	0.63	+1.1
3,100,453	-		HSERO_RS13650	0.78	+0.8
3,100,473	-		HSERO_RS13650	0.80	+1.5
3,100,956	-		HSERO_RS13655	0.78	+0.9
3,100,981	+		HSERO_RS13655	0.85	+1.2
3,101,533	-		HSERO_RS13660	0.68	+0.9
3,101,821	+				-0.4