Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13040

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,971,724	-				-0.2
2,971,801	+				+0.3
2,971,862	+		HSERO_RS13035	0.20	+0.3
2,971,901	-		HSERO_RS13035	0.33	+0.4
2,971,937	-		HSERO_RS13035	0.45	-0.1
2,971,949	+		HSERO_RS13035	0.49	-1.0
2,972,197	+		HSERO_RS13040	0.13	+0.5
2,972,293	-		HSERO_RS13040	0.24	-0.5
2,972,337	-		HSERO_RS13040	0.29	+0.6
2,972,567	-				+1.0
2,972,791	+		HSERO_RS13040	0.84	+1.3
2,973,144	+				-0.0
2,973,241	+				+0.0
2,973,453	+				-0.3
2,973,665	-		HSERO_RS13045	0.55	-0.8