Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12995

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,961,663	-		HSERO_RS12985	0.84	-0.3
2,961,783	+				-0.4
2,961,801	-				+1.0
2,961,983	-				-0.2
2,962,147	+		HSERO_RS12990	0.25	-0.6
2,962,340	+		HSERO_RS12990	0.54	-0.4
2,962,538	-		HSERO_RS12990	0.83	+0.6
2,962,569	-		HSERO_RS12990	0.88	-0.5
2,962,611	-				+1.0
2,963,119	-		HSERO_RS12995	0.61	-0.9
2,963,259	-		HSERO_RS12995	0.79	+3.0
2,963,325	+		HSERO_RS12995	0.87	+1.0
2,963,480	-				-0.2
2,963,795	+		HSERO_RS13000	0.57	+0.3
2,963,799	-		HSERO_RS13000	0.57	+0.1
2,963,814	+		HSERO_RS13000	0.60	+0.7
2,963,847	-		HSERO_RS13000	0.66	+0.3
2,963,851	-		HSERO_RS13000	0.67	-0.0