Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12765

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,908,115	+				-0.2
2,908,491	-		HSERO_RS12760	0.38	-0.1
2,908,514	+		HSERO_RS12760	0.41	-0.0
2,908,568	+		HSERO_RS12760	0.47	-0.4
2,909,001	+				-0.6
2,909,034	+				+0.3
2,909,159	+		HSERO_RS12765	0.10	+1.6
2,909,159	+		HSERO_RS12765	0.10	-0.1
2,909,167	-		HSERO_RS12765	0.11	+0.3
2,909,322	-		HSERO_RS12765	0.28	+0.4
2,909,404	-		HSERO_RS12765	0.37	+1.2
2,909,904	+				-0.5
2,909,960	+				-0.3
2,910,150	+				-0.3
2,910,158	-				-0.2
2,910,225	+		HSERO_RS12770	0.13	-0.6
2,910,387	+		HSERO_RS12770	0.34	+0.3
2,910,972	+				+1.0