Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12475

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,837,281	-		HSERO_RS12465	0.58	-0.2
2,837,292	+		HSERO_RS12465	0.59	+0.0
2,837,411	-		HSERO_RS12465	0.70	+0.0
2,837,420	+		HSERO_RS12465	0.71	+1.4
2,837,856	-		HSERO_RS12470	0.25	-0.8
2,837,975	+		HSERO_RS12470	0.51	-1.2
2,838,320	-				+0.2
2,838,345	+				+0.3
2,838,392	-				-0.3
2,838,983	+		HSERO_RS12475	0.46	+0.4
2,839,889	+				-0.1
2,839,932	+				+0.2
2,840,000	-				+0.3
2,840,010	-				-0.4
2,840,061	+				+0.3
2,840,069	-				-0.8
2,840,069	-				-0.3
2,840,069	-				+0.0
2,840,404	-		HSERO_RS12480	0.44	-0.2
2,840,713	+				-0.2