Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12400

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,815,059	-				-0.5
2,815,297	+				-0.6
2,815,319	+		HSERO_RS12395	0.13	-1.0
2,815,446	-		HSERO_RS12395	0.34	-0.4
2,815,736	-		HSERO_RS12395	0.83	+0.3
2,815,860	+				+0.2
2,815,989	-				+0.7
2,816,077	+				-0.4
2,816,120	+		HSERO_RS12400	0.21	+0.6
2,816,317	-		HSERO_RS12400	0.49	+1.4
2,816,520	+		HSERO_RS12400	0.78	+0.5
2,816,575	+		HSERO_RS12400	0.86	+0.1
2,816,582	+		HSERO_RS12400	0.87	+2.0
2,816,661	-				-0.3
2,816,705	+				-0.2
2,816,735	-				-1.0
2,816,921	+				+0.3
2,817,059	+				-0.7
2,817,316	+		HSERO_RS12405	0.23	-0.4
2,817,430	-		HSERO_RS12405	0.31	+0.1
2,817,565	-		HSERO_RS12405	0.40	-0.4
2,817,604	-		HSERO_RS12405	0.43	+0.2