Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11565

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,610,912	+		HSERO_RS11560	0.13	-0.6
2,610,917	+		HSERO_RS11560	0.14	-0.1
2,611,125	-		HSERO_RS11560	0.39	+0.3
2,611,419	-		HSERO_RS11560	0.74	-0.1
2,611,520	+		HSERO_RS11560	0.87	+0.6
2,611,520	+		HSERO_RS11560	0.87	+0.1
2,611,520	+		HSERO_RS11560	0.87	-0.3
2,611,520	+		HSERO_RS11560	0.87	+0.0
2,611,672	+				+0.4
2,611,680	-				+0.5
2,611,773	-		HSERO_RS11565	0.16	-0.0
2,611,800	-		HSERO_RS11565	0.21	+0.8
2,611,889	-		HSERO_RS11565	0.36	-0.1
2,612,074	+		HSERO_RS11565	0.66	+0.6
2,612,079	+		HSERO_RS11565	0.67	+0.9
2,612,115	-		HSERO_RS11565	0.73	+0.4
2,612,677	+		HSERO_RS11570	0.21	+0.6
2,612,697	-		HSERO_RS11570	0.22	+0.9
2,612,775	-		HSERO_RS11570	0.26	+0.5
2,612,801	+		HSERO_RS11570	0.27	-0.4
2,612,801	+		HSERO_RS11570	0.27	-0.1
2,612,802	+		HSERO_RS11570	0.27	-0.3
2,612,809	-		HSERO_RS11570	0.28	+0.5
2,612,810	-		HSERO_RS11570	0.28	+0.0
2,612,810	-		HSERO_RS11570	0.28	+0.3
2,613,185	-		HSERO_RS11570	0.48	+0.2
2,613,262	+		HSERO_RS11570	0.52	-0.2