Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10515

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,363,707	-		HSERO_RS10505	0.54	-0.1
2,363,874	-		HSERO_RS10505	0.67	-0.3
2,364,052	+		HSERO_RS10505	0.81	+0.9
2,364,086	+		HSERO_RS10505	0.84	-0.2
2,364,148	-		HSERO_RS10505	0.88	+0.3
2,364,206	-				+0.0
2,364,644	-				+0.3
2,364,699	-				+3.2
2,364,764	+		HSERO_RS10515	0.13	+4.3
2,364,764	+		HSERO_RS10515	0.13	+3.9
2,364,893	+		HSERO_RS10515	0.26	+3.7
2,365,082	+		HSERO_RS10515	0.45	+3.6
2,365,090	-		HSERO_RS10515	0.46	+4.3
2,365,170	+		HSERO_RS10515	0.54	+4.4
2,365,506	+		HSERO_RS10515	0.89	+4.2
2,365,540	+				+4.3
2,365,728	-		HSERO_RS10520	0.24	+4.0
2,365,739	-		HSERO_RS10520	0.30	+4.3
2,365,791	-		HSERO_RS10520	0.56	+4.1
2,366,100	-		HSERO_RS10525	0.10	+3.9
2,366,238	-		HSERO_RS10525	0.17	+3.9
2,366,256	-		HSERO_RS10525	0.18	+4.3
2,366,548	-		HSERO_RS10525	0.31	+3.8