Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10355

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,330,660	+				+0.1
2,330,908	+				-1.9
2,331,125	+		HSERO_RS10350	0.81	-0.5
2,331,215	-				-2.3
2,331,627	-		HSERO_RS10355	0.33	+0.7
2,331,700	+		HSERO_RS10355	0.39	-0.5
2,332,189	-		HSERO_RS10355	0.84	+0.7
2,332,189	-		HSERO_RS10355	0.84	+1.0
2,332,189	-		HSERO_RS10355	0.84	+0.5
2,332,216	-		HSERO_RS10355	0.87	+0.2
2,332,315	-				+0.7
2,332,350	-				+0.6
2,332,524	+				-0.3
2,332,531	+				+0.3
2,332,532	-				-0.2
2,332,532	-				-0.1
2,332,626	+				-0.2
2,332,634	-				+0.4
2,332,634	-				-0.6
2,332,860	+				-0.7
2,332,899	+		HSERO_RS10360	0.10	-0.1
2,332,983	+		HSERO_RS10360	0.15	+0.2
2,333,012	+		HSERO_RS10360	0.16	-0.2
2,333,020	-		HSERO_RS10360	0.17	-0.0
2,333,149	-		HSERO_RS10360	0.23	+0.5