Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10310

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,321,901	+				+0.3
2,322,144	+		HSERO_RS10305	0.23	+0.7
2,322,264	+		HSERO_RS10305	0.35	+0.8
2,322,418	-		HSERO_RS10305	0.51	+0.9
2,322,418	-		HSERO_RS10305	0.51	+0.7
2,322,666	+		HSERO_RS10305	0.76	+1.3
2,322,953	+				+0.6
2,322,986	+				+0.5
2,322,986	+				+0.7
2,322,994	-				+0.7
2,322,994	-				+0.2
2,323,038	-				+0.6
2,323,208	+		HSERO_RS10310	0.17	+0.4
2,323,286	+		HSERO_RS10310	0.22	+0.5
2,323,502	+		HSERO_RS10310	0.34	+0.5
2,323,525	+		HSERO_RS10310	0.35	+0.8
2,323,546	+		HSERO_RS10310	0.36	+0.5
2,324,305	-		HSERO_RS10310	0.79	+0.9
2,324,347	+		HSERO_RS10310	0.81	+1.4
2,324,554	-				+0.8
2,324,602	-				+0.5
2,324,616	+				+0.7
2,324,735	+				+1.1
2,324,735	+				+0.6
2,324,764	+				+0.7
2,324,805	-				+1.0
2,324,994	-				+1.3
2,325,096	+		HSERO_RS10315	0.46	+0.6
2,325,106	+		HSERO_RS10315	0.48	+1.0
2,325,106	+		HSERO_RS10315	0.48	+1.2
2,325,249	-		HSERO_RS10315	0.89	+1.0
2,325,258	-				+0.6
2,325,258	-				+0.7
2,325,528	+		HSERO_RS10320	0.16	-0.0