Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10215

Experiment: Carbon source Phenylacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 5 mM
2,302,324	+		HSERO_RS10210	0.73	+0.8
2,302,325	-				+1.7
2,302,817	+		HSERO_RS10215	0.24	+0.8
2,302,825	-		HSERO_RS10215	0.25	+1.0
2,302,950	+		HSERO_RS10215	0.36	+0.8
2,303,170	+		HSERO_RS10215	0.56	+0.9
2,303,185	+		HSERO_RS10215	0.57	+1.0
2,303,451	-		HSERO_RS10215	0.80	+0.7
2,303,492	-				+1.7
2,303,606	-				+1.0
2,303,771	+				+0.8
2,303,841	-				+0.7
2,304,239	+		HSERO_RS10220	0.49	-0.5
2,304,657	+				+0.9